Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1346 ATGCAAGAGACGCTCCTCAGTCTTTCCGAACACCACCACCAAGACGACAGCAACAACAAAGACATCGAGCTGCTTCTGGTTCCGCCGCCGTGCCGCCGCCAGCCGCGGATGGCGCGGCGCGTGTCTCCGGGCGCGGTGGAAAAAGCCCTCCCCTGCGGCGACATCTACAGCGGAAGCCTCTCCGGCAACGTCCCTCACGGCACCGGAAAATACCTCTGGTCGGACGGGTGTATGTACGAGGGCGAGTGGAAGAAAGGCAAGGCGTGCGGCAAGGGCCGCTTCTCGTGGCCCACCGGCGCCACCTACGAGGGCGAGTTCGCCGCCGGGAGAATGCAGGGCCACGGCACCTTCGTCGGCGTCGACGGCGACACCTACCGCGGCGCGTGGCTCTCCGACCGCAAGCACGGCTTCGGCGAAAAGCGCTACGCCAACGGCGACGTCTACGAAGGGTTCTGGAGGTGCAACCTGCAAGAAGGGGAAGGGAGGTACACGTGGCGCAACGGGAACGAGTACGTCGGAGAGTGGAAGAACGGCGCCATCTCCGGTAATGGCGTGCTGGTGTGGAAGAACGGGAACCGTTACGAAGGGTGTTGGGAGAACGGTGTTCCGAAGGGGAGAGGGGTGTTTACGTGGCGCGATGGAAACACTTCTTCTGGGAATTGGGGGAAAGAGTTTGTGAACGAGAAACGTGTGTCGGTGGATGAGTGTAGTAATAATAATAATAATAATAACAGTAATAGTAATAATAAGAGTGTGAGTTTTCCCAGAATTTGTATTTGGGAGCTTGATGGTGAAGCTGGGGATATCACTTGTGATATTGTGGAGGCTTCTATGATTTATGGTGGAGGAGGAGTGTGTGAAAGTGATGTACAGTTGCAGAAGAGCCCTTGTGGTTCTGTTGATGGGGATGTTAAGAAACCGGGTCATACGGTTTCTAAAGGACATAAGAATTATGATTTGATGCTTAATCTTCAACTGGGTATTAGATACTCTGTTGGGAAGCACGCTTCGGTCTTCCGAGAGCTTAGGCCGGGCGATTTTGATCCCAAGGAGAAGTTCTGGACGAGGTTTCCTCCAGAAGGGTCTAAGTTTACACCTCCACATCAGTCTGTGGATTTCAGGTGGAAAGATTACTGTCCTGTGGTGTTTCGGCATCTAAGGGAATTATTTGGGATAGATCCTGCGGATTACATGCTTGCTATTTGTGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGACGACCGGTTCATTATCAAAACCTTGAAGAAGTCGGAAGTCAAGGTGCTCATCAGGATGCTTCCAAGTTACTATCAACATGTGCGTCAGTACAAGAATTCGCTGGTAACAAAATTCCTGGGGGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACTCGATTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGGATCCATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGCCGCACAACCGATAAACCCCAGGAGGAAATTGATGAGACTACCACTCTTAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAAGAGTCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTTCGTGATGATAGCTCAGTTGATGAAGTAGTAAAGAGTTTACCGGACGAGTTGTGTTCAGGCAAGAGAGACATGCAAAATGATGACGTACAGGATATGAAATGGATACCCATAGACCGGGGACCTCTAATTCGGCTGGGAACAAACATGCCGGCCAGAGCAGAGAGAGTGTGTAAAGCTGGATTGGATCAGCACACTGGTACTGGAAGTAGCAATTCTATCCCTTCAGAGAGTGGTGGTGAGGTCTCTGATGTAATCCTTTACTTTGGTATAATTGACATTCTCCAAGATTATGATATAAGCAAAAAGCTAGAGCACGCATACAAGTCACTGCAAGTGGATCCCTCCTCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATGA 2124 0.4958 MQETLLSLSEHHHQDDSNNKDIELLLVPPPCRRQPRMARRVSPGAVEKALPCGDIYSGSLSGNVPHGTGKYLWSDGCMYEGEWKKGKACGKGRFSWPTGATYEGEFAAGRMQGHGTFVGVDGDTYRGAWLSDRKHGFGEKRYANGDVYEGFWRCNLQEGEGRYTWRNGNEYVGEWKNGAISGNGVLVWKNGNRYEGCWENGVPKGRGVFTWRDGNTSSGNWGKEFVNEKRVSVDECSNNNNNNNSNSNNKSVSFPRICIWELDGEAGDITCDIVEASMIYGGGGVCESDVQLQKSPCGSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVFRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFGIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVRQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPQEEIDETTTLKDLDLCFVFRLEESWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDSSVDEVVKSLPDELCSGKRDMQNDDVQDMKWIPIDRGPLIRLGTNMPARAERVCKAGLDQHTGTGSSNSIPSESGGEVSDVILYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIFVEDK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1346 707 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 22 707 IPR023610 -
Gso6g1346 707 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 53 173 - -
Gso6g1346 707 SUPERFAMILY SAICAR synthase-like 313 703 - -
Gso6g1346 707 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g1346 707 Gene3D - 485 703 - -
Gso6g1346 707 PIRSF PIP5K_plant 227 707 IPR017163 GO:0005524|GO:0016308
Gso6g1346 707 PIRSF PIP5K_plant 12 253 IPR017163 GO:0005524|GO:0016308
Gso6g1346 707 SMART morn 192 213 IPR003409 -
Gso6g1346 707 SMART morn 54 75 IPR003409 -
Gso6g1346 707 SMART morn 100 121 IPR003409 -
Gso6g1346 707 SMART morn 123 144 IPR003409 -
Gso6g1346 707 SMART morn 146 167 IPR003409 -
Gso6g1346 707 SMART morn 77 98 IPR003409 -
Gso6g1346 707 SMART morn 169 190 IPR003409 -
Gso6g1346 707 CDD PIPKc_AtPIP5K_like 317 702 - -
Gso6g1346 707 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 303 484 IPR027484 -
Gso6g1346 707 Pfam MORN repeat 56 78 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 171 193 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 194 216 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 148 169 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 79 100 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 125 147 IPR003409 -
Gso6g1346 707 Pfam MORN repeat 102 124 IPR003409 -
Gso6g1346 707 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 314 703 IPR002498 GO:0016307|GO:0046488
Gso6g1346 707 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 402 702 IPR002498 GO:0016307|GO:0046488
Gso6g1346 707 Gene3D - 86 130 - -
Gso6g1346 707 Gene3D - 41 85 - -
Gso6g1346 707 Gene3D - 178 254 - -
Gso6g1346 707 Gene3D - 131 177 - -
Gso6g1346 707 SMART PIPK_2 343 704 IPR002498 GO:0016307|GO:0046488
Gso6g1346 707 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 22 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1346 Gso-Chr6 13223013 13228030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1346 27 706 Acyl Lipid Metabolism Gene Families AT1G21980 65.690 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1346 K00889 - gmx:100780680 1476.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1738 4 47469240 47474366 Gso6g1346 6 13223013 13228030 GST
Gso5g1676 5 40047890 40053354 Gso6g1346 6 13223013 13228030 PCT
Gso8g0038 8 359439 364415 Gso6g1346 6 13223013 13228030 PCT
Gso6g1346 6 13223013 13228030 Gso5g1676 5 40047890 40053354 PCT
Gso6g1346 6 13223013 13228030 Gso8g0038 8 359439 364415 PCT