Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1738 ATGCAAGAGACGCTCCTCACTCTCTCCGAACACCAACAAGACGACAACAACAAAGACATCGAGCTGCTCGTGGTTCCTCCGCCGCCGTGCCGCCGCCCTCCGCGGATGGCGCGGCGCGTGTCCCCCGGCGCGGTGGAAAAAGCCCTCCCCAACGGCGACATCTACAGCGGAAGCCTCTCCGGCAACGTCCCGCACGGCACCGGAAAATACCTCTGGTCGGATGGGTGCATGTACGAGGGCGACTGGAAGAAAGGCAAAGCGTGCGGCAAGGGCCGCTTCTCGTGGCCCTCCGGCGCGACCTACGAGGGCGAGTTCGCCGCCGGGAGAATGCACGGCCGCGGCACCTTCGTCGGCGTCGACGGCGACACCTACCGCGGCGCGTGGCTCTCCGACCGCAAGCACGGCTTCGGCGAGAAACGCTACGCCAACGGCGACGTCTACGAAGGGTTCTGGAGGTGCAACCTGCAGGAGGGGGAAGGGAGGTACACGTGGCGCAACGGAAACAACTACGTCGGAGAGTGGAAGGGTGGCGCCATCTCCGGCAAAGGCGTGTTGGTGTGGAAGAACGGGAACCGTTACGAAGGGTGCTGGGAGAACGGGGTTCCGAAGGGGAGAGGGGTGTTTACGTGGCGCGATGGAAGCACTTCCTCTGGGAATTGGGGGAAGGAGTTCGTGAATGAGAAACGCGTGTCGGTGGATGTCTGTAGTAATCACAACAATAATAAGAGTGTGAGTTTTCCCAGGATTTGTATTTGGGAGCTTGATGGTGAAGCTGGGGATATTACTTGTGATATTGTGGAGGCTTCTATGATTTATGGTGGTGGTGGAGGAGTGTGTGAGAGTGATGTACAGTTGCAGAAGAGTCCTTGTGGTTCTGTTGATGGGGATGTTAAGAAACCGGGTCATACTGTTTCTAAAGGCCATAAGAATTATGATTTGATGCTTAATCTTCAACTGGGTATTAGATACTCTGTTGGGAAGCACGCTTCGGTTTTGCGAGATCTTAGGCCGGGGGATTTTGATCCCAAGGAGAAGTTCTGGACTAGGTTTCCTCCAGAAGGGTCTAAGTTTACACCTCCACATCAATCTGTGGATTTCAGGTGGAAAGATTACTGCCCTGTGGTGTTCAGACATCTAAGGGAATTGTTTGGGATAGATCCTGCGGATTACATGCTTGCTATTTGCGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGACGACTGGTTCATTATCAAAACCTTGAAGAAGTCGGAAGTCAAGGTGCTCATCAGGATGCTTCCAAGTTACTATCAACATGTGAGTCAGTACAAGAATTCGCTGGTGACAAAATTCCTGGGGGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACTCGGTTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGGATCCATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGTACAACTGATAAACCCCGGGAGGAAATTGACGAGACTACCACTCTTAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAACATTCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTTCGTGATGATAGCTCAGTTGATGAAGTAAAGAGTTTACCAGACGAGTTGTGTTCAGGCAAGAGAGACATGCAAAATGATGACATACAGGATATGAAGTGGATACCCATAGACCGGGGACCTCTAATTCGTCTGGGAACAAACATGCCTGCCAGAGCAGAGAGAGTGTGTAAAGCTGGATTGGATCCGCACACTGGTACTGGAAGTAGCAATTCTACCCCTTCAGAGAGTGGTGGTGAGGTCTCTGATGTAATCCTTTACTTTGGTATAATTGACATTCTCCAAGATTATGATATAAGCAAAAAGCTAGAGCATGCATACAAGTCACTGCAAGTGGATCCCTCCTCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATGA 2100 0.5024 MQETLLTLSEHQQDDNNKDIELLVVPPPPCRRPPRMARRVSPGAVEKALPNGDIYSGSLSGNVPHGTGKYLWSDGCMYEGDWKKGKACGKGRFSWPSGATYEGEFAAGRMHGRGTFVGVDGDTYRGAWLSDRKHGFGEKRYANGDVYEGFWRCNLQEGEGRYTWRNGNNYVGEWKGGAISGKGVLVWKNGNRYEGCWENGVPKGRGVFTWRDGSTSSGNWGKEFVNEKRVSVDVCSNHNNNKSVSFPRICIWELDGEAGDITCDIVEASMIYGGGGGVCESDVQLQKSPCGSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRDLRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFGIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDWFIIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLCFVFRLEHSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDSSVDEVKSLPDELCSGKRDMQNDDIQDMKWIPIDRGPLIRLGTNMPARAERVCKAGLDPHTGTGSSNSTPSESGGEVSDVILYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFIHRIFVEDK* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1738 699 SUPERFAMILY SAICAR synthase-like 306 695 - -
Gso4g1738 699 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 21 699 - -
Gso4g1738 699 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 395 694 IPR002498 GO:0016307|GO:0046488
Gso4g1738 699 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 303 695 IPR002498 GO:0016307|GO:0046488
Gso4g1738 699 SMART morn 53 74 IPR003409 -
Gso4g1738 699 SMART morn 122 143 IPR003409 -
Gso4g1738 699 SMART morn 191 212 IPR003409 -
Gso4g1738 699 SMART morn 168 189 IPR003409 -
Gso4g1738 699 SMART morn 145 166 IPR003409 -
Gso4g1738 699 SMART morn 76 97 IPR003409 -
Gso4g1738 699 SMART morn 99 120 IPR003409 -
Gso4g1738 699 MobiDBLite consensus disorder prediction 622 637 - -
Gso4g1738 699 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 50 177 - -
Gso4g1738 699 Pfam MORN repeat 78 99 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 101 123 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 170 192 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 124 146 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 147 168 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 193 215 IPR003409 -
Gso4g1738 699 Pfam MORN repeat 55 77 IPR003409 -
Gso4g1738 699 Gene3D - 85 133 - -
Gso4g1738 699 Gene3D - 39 84 - -
Gso4g1738 699 Gene3D - 172 247 - -
Gso4g1738 699 SMART PIPK_2 336 696 IPR002498 GO:0016307|GO:0046488
Gso4g1738 699 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 21 699 IPR023610 -
Gso4g1738 699 PIRSF PIP5K_plant 222 699 IPR017163 GO:0005524|GO:0016308
Gso4g1738 699 PIRSF PIP5K_plant 35 228 IPR017163 GO:0005524|GO:0016308
Gso4g1738 699 CDD PIPKc_AtPIP5K_like 310 694 - -
Gso4g1738 699 Gene3D - 478 695 - -
Gso4g1738 699 MobiDBLite consensus disorder prediction 617 637 - -
Gso4g1738 699 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 296 477 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1738 Gso-Chr4 47469240 47474366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1738 20 698 Acyl Lipid Metabolism Gene Families AT1G21980 66.620 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1738 K00889 - gmx:100808235 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1738 4 47469240 47474366 Gso6g1346 6 13223013 13228030 GST
Gso5g1676 5 40047890 40053354 Gso4g1738 4 47469240 47474366 PCT
Gso8g0038 8 359439 364415 Gso4g1738 4 47469240 47474366 PCT
Gso4g1738 4 47469240 47474366 Gso5g1676 5 40047890 40053354 PCT
Gso4g1738 4 47469240 47474366 Gso8g0038 8 359439 364415 PCT