Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1344 ATGGCAGGGGATTCAAATTCAAAGAGGCGTGTCAGCAGAAGCACTGAATCCAAAAACACACAGGACATAAACATAAACATAATTGAAGGGAATAATAACCCAAAAGCGCAGGTGCAAGAACGTGCTGCAGTTTTTGACCAACATTTCTACGATGGAATCCCATTCTTTGCTGATAATAAGCCTTCTAGAACCAACGAGAAGGCTTCTACCACTGCGGGTGAAGAGTTCTACGACGGAATCCCGCGCTTCCCCGAGGACTCCTTGCCGAACAAGCCTAAGTCAAAGGTCTCAGAGGTGAGTTTACGCTTGGGCAAAGCTGTTACTACTGGAATTGCTATTGGATTAGAGAAAGCAGTAGAGGTTTTGGACACTCTTGGGAGCAGCCTGACAAATTTAAATGTGAGCAGTGGGTTTTCTTCTGGAGCTGCAATAAAGGGGAATAAAATTTCTATCTTAGCATTTGAGGTTGCAAACACAATTGTCAAAGGTTTTAATCTTCTGCAATCTCTTTCTGCAAAAAGCATTAGGCATTTAAAAGAAGAGGTGCTTCTTTCTGTGGCTGTGCAAAATTTAGTATCAAAGGATATGGATGAACTTCTTAGGATTGTTGCAGCAGACAAGAGGCAAGAGTTGGAAGTTTTTTCTAATGAGGTGATTCGTTTTGGAAATCGTTCGAAGGATCCTCAGTGGCGCAACTTAGACTGTTACTTTGAGAAACAAACCCACATGCTCAAAGATGGAAATCCTAGTAGGATTAGCAGAGAAATAAATGTTCAAAGGCTGTCAAGAGACGAGCCAGAATTAATAATGCTACAGTTGATGACTTTGGCTGATTTTACAGTTGAATTGTATCATGAATTAGATGCTTTGGATAAACTTGAACAAGATTTTCAGCGTAAGTGTGAGGAGGAGGATCAAAGAGGTGATAGCCTTGCATTGTTGAGGGCAGAGATTAAAAGTCATATGAGGCAAATTAGACATTTAAAGAAGAAATCACTCTGGTGCAGAAGTTTAGAGGAGGTTGTGAGGAAGCTTGTAGCCATTGTCCTTTTTTTGCATTTGGAGATAAGCAATGCCTTGGGCAATGCAGATGACCATGGACCATTAACTGGACATATGAGCAATTGCCAAAGATTGGGCCCTGCAGGCCTTGCTTTGCATCATGCAAATATAGTGCTTCAAATTGATACTCTTGTAGACAAATCCACTATGCCTGCAAATACAAAGGATGCATTATATCAAAGCTTGCCTCCTAATATAAAATTAGCTCTACGTTCCAAATTACCATCCCTCCGTGCTGTAGAAGAGATAAGTGTAGCCTATATCACATATGAGATGCATAAAAAATTACATTGGTTGGTTCCCATGGCCATTAACACATCCAAAGCACATAAGAGATTTGGTTGGCTAGGGGAGTGGGCATACTCAGGGTATGAAGTAAAAAAGAAGACTGGTGTAATGTGGATTGAGACATTCTACCATGCAGATAGAGAGAAAGTGGAACATTGTATTCTTGAACTTCTCTTATGGCTTCATCGCTTGGCCATCAGAAGTAAGGCTCACAGTGATGCTATTGCTGGCTAA 1584 0.4097 MAGDSNSKRRVSRSTESKNTQDININIIEGNNNPKAQVQERAAVFDQHFYDGIPFFADNKPSRTNEKASTTAGEEFYDGIPRFPEDSLPNKPKSKVSEVSLRLGKAVTTGIAIGLEKAVEVLDTLGSSLTNLNVSSGFSSGAAIKGNKISILAFEVANTIVKGFNLLQSLSAKSIRHLKEEVLLSVAVQNLVSKDMDELLRIVAADKRQELEVFSNEVIRFGNRSKDPQWRNLDCYFEKQTHMLKDGNPSRISREINVQRLSRDEPELIMLQLMTLADFTVELYHELDALDKLEQDFQRKCEEEDQRGDSLALLRAEIKSHMRQIRHLKKKSLWCRSLEEVVRKLVAIVLFLHLEISNALGNADDHGPLTGHMSNCQRLGPAGLALHHANIVLQIDTLVDKSTMPANTKDALYQSLPPNIKLALRSKLPSLRAVEEISVAYITYEMHKKLHWLVPMAINTSKAHKRFGWLGEWAYSGYEVKKKTGVMWIETFYHADREKVEHCILELLLWLHRLAIRSKAHSDAIAG* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1344 527 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g1344 527 PANTHER DUF668 FAMILY PROTEIN 9 524 - -
Gso6g1344 527 Pfam Protein of unknown function (DUF668) 378 461 IPR007700 GO:0045927
Gso6g1344 527 PANTHER OS01G0873900 PROTEIN 9 524 IPR045021 GO:0045927
Gso6g1344 527 Coils Coil 311 331 - -
Gso6g1344 527 Pfam Domain of unknown function (DUF3475) 151 207 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1344 Gso-Chr6 13197332 13205387 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1344 - - gmx:100780146 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1671 5 39995449 40003372 Gso6g1344 6 13197332 13205387 PCT
Gso8g0035 8 323830 331996 Gso6g1344 6 13197332 13205387 PCT
Gso6g1344 6 13197332 13205387 Gso5g1671 5 39995449 40003372 PCT
Gso6g1344 6 13197332 13205387 Gso8g0035 8 323830 331996 PCT