Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1671 ATGGGGGGTCTTTGTTCAAAGTCTGCCAAAGGTGACAAGGTGTTTGCCAAATCAGATGGACATTCTGATAAACATAAATCTGATGGTAAGAACCACAAGTCCACCAGCATGCCTAGTAATTTGACTAGTGCAGGGGAACATGGAGTGGACAAGAAAAAACAAGAAGGTTCTGCTGCTGCTGCAGGGAATGGTTCTGATGATTTCTATGATGGAATCCCACGGTTTACTGATTCTTTTTCCCACAAGTCTAGGTCAGTAAAATCAAGGCATGCTGTGGCGAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGACGTTTTGGACACTCTTGGAAGCAGTATGACAAATTTAAGTGCTGGTGGGTTTGTATCTGGAGCTGTGACAAAGGGGAATGAAATTGGTATTTTAGCATTTGAGGTTGCAAACACTATTGTCAAGGGTTTTAGTCTTATGGAATCTCTTTCGACAAAAAGTATTAAGCATTTAAAAGAAGAGGTGCTTCCATTAGAGGCTGTGCAAGATTTAGTATCAAAGGATATGGATGAGCTTCTAAGGATTGTTGCTGCAGACAAAAGGGATGAGTTGAAAGTCTTTTCTGATGAGGTAATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAGTTAGCAGAGAACTTAATTCTCAAAGACAACCAAAGGAGGAGGCAGAATTACTAATGCAACAATTGATGACGTTGGTTCAGTTAACAGCTGAATTATACCATGAGTTACATGCTTTGGATAGATTTGCACAAGATTATCAGCATAAGCGTGAAGAGGATGATAATTCAGGTGCAGCTCAAAGTGGTGATGGCCTTTCAATCTTGAGGGCAGAACTTAAAAGTCAAAAAAAGCAAGTTAAACATTTGAAAAAAAAGTCACTCTGGTCCAGAAGTTTGGAGGAGATTATGGAGAAGCTTGTAGAGATAGTCCATTTTTTGCATTTGGAGATAAACAATGCCTTTGGCACTGAAGATGACCATAAACCATTAATTCAAACCATCAGCAGTCGCCAAAAATTGGGTCCTGCAGGCCTTGCTTTGCATTATGCTAATATAGTGCTCCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCTGCAAATACAAGGGATGCATTGTATCAGAGCTTGCCTCCTAATATAAAATCAGCTTTGCGTTCCAAATTACCAAGCTTTCATGTCGTAAAGCAGCTCACCATATCAAATATTAAAGAAGAGATGGAGAAAACATTGCATTGGCTGGTTCTGATTGCTACAAACACGGCCAAAGCACATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGTTCTGAGCTAAATAAGAAGACCATGAAGGCTGATGTGATGCGGATTGAAACGCTTCACCATGCCGATAAAGCTAAAGTAGAAAATTATATTCTTGAACTTCTCATATGGCTTCACCGCTTGGCCATCAAAAGTAAAGATGGCATTGATACCGGAGAAACGAGGTCTACCTTAAAGTCTCATGTTGGCACTGCCATTCAAACTACAAGTCAACAATCAACAAAAGCCTTACTGCCATTGTTAACAACTGACGAGCAGAAAATGCTGCAAGATGTTAGTAATAAAATTCACATAAGAAGGATCAGTAAAAGCTTGGACTTTGACAGTTTGAAGACAGATAATGACAGACTTACTAAGAGTAGCAGTTATTCTTATTCATCAACAAGTAGAAGCAAGGAATTATCTTTTAATAGAATTTTGTCTAAGCTTCCTGTTATTGATTTTGGTATTGACAAAAAAAGAGCATTGGATGTGATTGACAGATTAGATGTGGCCAGATAA 1872 0.398 MGGLCSKSAKGDKVFAKSDGHSDKHKSDGKNHKSTSMPSNLTSAGEHGVDKKKQEGSAAAAGNGSDDFYDGIPRFTDSFSHKSRSVKSRHAVAKVSEVSLRLGRAGIDVLDTLGSSMTNLSAGGFVSGAVTKGNEIGILAFEVANTIVKGFSLMESLSTKSIKHLKEEVLPLEAVQDLVSKDMDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKVSRELNSQRQPKEEAELLMQQLMTLVQLTAELYHELHALDRFAQDYQHKREEDDNSGAAQSGDGLSILRAELKSQKKQVKHLKKKSLWSRSLEEIMEKLVEIVHFLHLEINNAFGTEDDHKPLIQTISSRQKLGPAGLALHYANIVLQIDTLVARSSSMPANTRDALYQSLPPNIKSALRSKLPSFHVVKQLTISNIKEEMEKTLHWLVLIATNTAKAHHGFGWVGEWASTGSELNKKTMKADVMRIETLHHADKAKVENYILELLIWLHRLAIKSKDGIDTGETRSTLKSHVGTAIQTTSQQSTKALLPLLTTDEQKMLQDVSNKIHIRRISKSLDFDSLKTDNDRLTKSSSYSYSSTSRSKELSFNRILSKLPVIDFGIDKKRALDVIDRLDVAR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1671 623 Pfam Domain of unknown function (DUF3475) 138 194 IPR021864 GO:0045927
Gso5g1671 623 Coils Coil 291 311 - -
Gso5g1671 623 PANTHER DUF668 FAMILY PROTEIN 2 623 - -
Gso5g1671 623 PANTHER OS01G0873900 PROTEIN 2 623 IPR045021 GO:0045927
Gso5g1671 623 MobiDBLite consensus disorder prediction 1 65 - -
Gso5g1671 623 Pfam Protein of unknown function (DUF668) 359 443 IPR007700 GO:0045927
Gso5g1671 623 MobiDBLite consensus disorder prediction 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1671 Gso-Chr5 39995449 40003372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1671 - - gmx:100800289 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1671 5 39995449 40003372 Gso5g1671 5 39995449 40003372 ECH
Gso5g1671 5 39995449 40003372 Gso8g0035 8 323830 331996 GST
Gso5g1671 5 39995449 40003372 Gso6g1344 6 13197332 13205387 PCT
Gso6g1344 6 13197332 13205387 Gso5g1671 5 39995449 40003372 PCT