Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1317 ATGGAATTGGAAGTCACCGCCGCTACTTCTCCACCTTCTCGCGTTCTCCTCATCTCCGCCGGTGCCAGCCACACCGTTGCCCTTCTCTCTGGGAATGTTGTGTGCTCGTGGGGTCGCGGAGAGGATGGACAGTTAGGCCATGGTGACACCGATGATAGACTCTTACCCACTCATCTCAGTGCATTGGATGCTCAACAAATTGATTCTATTGCATGTGGAGCTGATCATACCCTTGCGTATTCCGAATCACGCAATGAACTCTATAGTTGGGGATGGGGTGATTTTGGAAGGTTGGGTCATGGCAATTCTAGTGATTTGCTCATTCCTCAGCCTATTATAGCATTGCAAGGTCTAAGGATAAAGCAAATTGCCTGTGGGGATAGCCACTGTTTGGCAGTTACCATGGAAGGCGAGGTTCAGAGTTGGGGGAGGAATCAAAATGGTCAACTTGGACTTGGCACCTCGGAGGATTCTCTTGTGCCACAAAAGATTCAAACATTTCAGGGAGTACCTATCAAAATGGTTGCTGCAGGTGCAGAACACAGTGTAGCTATTACTGAAAATGGAGAACTGTATGGATGGGGTTGGGGCCGATATGGAAATTTGGGGTTGGGGGATAGAAATGATCGCTGGATTCCTGAGAAAGTTTCTTCTGTTGATTGTGACAAGATGGTCATGGTTGCTTGTGGTTGGCGGCATACAATTTCTGTTTCATCTTTGGGTGGCTTATACACATATGGGTGGAGCAAATATGGCCAGTTAGGACATGGAAATTTTGAGGATTCTCTTGTGCCTCAAAAGCTTCAAGCCTTGAGTGATAAGTTAATCAGTCAGGTATCGGGTGGTTGGAGGCATAGTATGGCACTGACGTCTACTGGACTACTATATGGATGGGGTTGGAATAAGTTTGGACAGGTTGGAGTTGGTGACAATGTTGATCGTTGCTCTCCTGTGCAAGTGAAGTTCCCCCATGATCAGGTACTTGAAATTAAAGTAGTTCAGATCTCATGTGGGTGGAGACACACAATTGCTGTAACTGAAAAGGAAAATGTATTTTCTTGGGGAAGAGGCACAAATGGGCAACTTGGGCATGGGGATACCGTTGACCGGAATTCTCCAAAGATTATTGAGGCATTGAGTGTGGATGGATCTTCCGGGCCGCACATAGAATCCTCAAACACTGATCTATTGTCAGGGAAAAGTGGTGCCTCCTTATCTGAGAGATATGCAGTTGTTCCGGATGAAACTGTCTCAGGACAAACTGCTAGTTCAAGCAGTGGAGATAGGCTTGATATCAGTGTCCCAGAAAGTGATGTCAAACGGATCCGAGTTTGA 1335 0.4652 MELEVTAATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQVLEIKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGSSGPHIESSNTDLLSGKSGASLSERYAVVPDETVSGQTASSSSGDRLDISVPESDVKRIRV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1317 444 MobiDBLite consensus disorder prediction 415 444 - -
Gso6g1317 444 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 227 237 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 241 292 IPR000408 -
Gso6g1317 444 MobiDBLite consensus disorder prediction 416 431 - -
Gso6g1317 444 PANTHER CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN 6 439 - -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 33 49 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 87 103 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 137 153 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 175 191 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 191 205 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 282 300 IPR000408 -
Gso6g1317 444 PRINTS Chromosome condensation regulator RCC1 signature 344 365 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 293 348 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 137 188 IPR000408 -
Gso6g1317 444 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 175 185 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 136 185 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 241 289 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 86 133 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 350 380 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 34 79 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 293 345 IPR000408 -
Gso6g1317 444 Pfam Regulator of chromosome condensation (RCC1) repeat 188 235 IPR000408 -
Gso6g1317 444 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 18 28 IPR000408 -
Gso6g1317 444 SUPERFAMILY RCC1/BLIP-II 12 61 IPR009091 -
Gso6g1317 444 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 6 439 - -
Gso6g1317 444 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 279 289 IPR000408 -
Gso6g1317 444 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 335 345 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 32 83 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 395 IPR000408 -
Gso6g1317 444 SUPERFAMILY RCC1/BLIP-II 137 380 IPR009091 -
Gso6g1317 444 Gene3D - 15 384 IPR009091 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 85 136 IPR000408 -
Gso6g1317 444 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 189 240 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1317 Gso-Chr6 12905054 12915228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1317 - - gmx:100776580 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1764 4 47757885 47766062 Gso6g1317 6 12905054 12915228 GST