Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1764 ATGAAATGTTATTTTGATGGACAATACAGGATAAGATGCGAAAAAACAACAGAGAAATCAAATTCTTTCATCATCAATGATATAAACTCCTTGCTCCTCTTGACTCATTCATTCACTCCCAATATGATGGAATTGGAAGCCACCGCCGCTACTTCCCCACCTTCTCGCGTTCTCCTCATCTCCGCAGGTGCCAGCCACACCGTTGCCCTTCTCTCTGGGAATGTTGTGTGTTCGTGGGGTCGCGGAGAGGACGGACAGTTAGGCCATGGTGACACCGATGATAGGCCCTTACCCACGCAGCTCAGTGCATTGGATGCCCAACACATTGATTCTATTGCCTGTGGAGCTGATCATACCCTTGCGTATTCCGAATCACGCAATGAACTCTATAGTTGGGGATGGGGTGATTTTGGAAGGTTGGGTCATGGCAATTCTAGTGATTTGCTCATTCCTCAGCCTATTATAGCATTGCAAGGTCTAAGGATAAAGCAAATTGCCTGTGGGGATAGCCACTGTTTGGCAGTTACCATGGAAGGCGAGGTTCAGAGTTGGGGGAGGAATCAAAATGGTCAACTTGGACTTGGCAACACAGAGGATTCTCTTGTGCCACAAAAGATTCAAGCGTTTAAGGGAGTTCCTATCAAAATGGTTGCTGCAGGTGCAGAACACAGTGTAGCTATTACTGAAAATGGAGAACTGTATGGATGGGGTTGGGGCCGATATGGAAATTTGGGGTTGGGAGATAGAAATGATCGCTGGAATCCTGAGAAAGTTTCTTCTGTTGATTGTGACAAGATGGTCATGGTTGCTTGTGGTTGGCGGCATACAATTTCTGTTTCATCTTCTGGTGGCTTATACACATACGGGTGGAGCAAATATGGCCAGCTAGGACATGGAAATTTTGAGGATTCTCTTGTGCCTCAGAAGCTTCAAGCCTTGAGTGATAAGTTAATCTCTCAGGTATCAGGTGGTTGGAGGCATAGTATGGCACTCACGTCTACTGGACTACTATTTGGATGGGGTTGGAATAAGTTTGGACAGGTTGGAGTCGGTGACAATGTTGATCACTGCTCTCCTGTGCAAGTGAAGTTCCCCCAAGATCAGAGAGTAGTTCAGATCTCATGTGGGTGGAGGCACACAATTGCTGTAACTGAAAAGGAAAATGTATTTTCTTGGGGAAGAGGCACAAATGGGCAACTTGGGCATGGGGATACCATTGACCGGAATTCTCCAAAGATTATTGAGGCATTGAGTGTGGATGGATCTGCTGGGCCGCACATAGAATCCTCAAACACTGATCTATTGTCAGGGAAAAGTGGCGTCTCCTTATCTGAGAGATATGCAGTTGTGCCGGACGAAACTGTCTCAGGACAAACTGCTAGTTCAAGCAGTGGAGATAGGCTTGAAATTAGTGTCCCAGAAAGTGATGTCAAACGGCTCCGTGTTTGA 1449 0.4631 MKCYFDGQYRIRCEKTTEKSNSFIINDINSLLLLTHSFTPNMMELEATAATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNVDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGSAGPHIESSNTDLLSGKSGVSLSERYAVVPDETVSGQTASSSSGDRLEISVPESDVKRLRV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1764 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 373 383 IPR000408 -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 74 125 IPR000408 -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 127 178 IPR000408 -
Gso4g1764 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 217 227 IPR000408 -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 283 334 IPR000408 -
Gso4g1764 482 SUPERFAMILY RCC1/BLIP-II 177 418 IPR009091 -
Gso4g1764 482 PANTHER CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN 43 477 - -
Gso4g1764 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 321 331 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 128 175 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 178 227 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 230 277 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 282 331 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 76 121 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 388 418 IPR000408 -
Gso4g1764 482 Pfam Regulator of chromosome condensation (RCC1) repeat 335 383 IPR000408 -
Gso4g1764 482 MobiDBLite consensus disorder prediction 453 482 - -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 387 433 IPR000408 -
Gso4g1764 482 MobiDBLite consensus disorder prediction 454 469 - -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 179 230 IPR000408 -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 231 282 IPR000408 -
Gso4g1764 482 SUPERFAMILY RCC1/BLIP-II 52 103 IPR009091 -
Gso4g1764 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 60 70 IPR000408 -
Gso4g1764 482 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 335 386 IPR000408 -
Gso4g1764 482 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 269 279 IPR000408 -
Gso4g1764 482 Gene3D - 53 428 IPR009091 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 75 91 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 129 145 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 179 195 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 217 233 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 233 247 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 324 342 IPR000408 -
Gso4g1764 482 PRINTS Chromosome condensation regulator RCC1 signature 382 403 IPR000408 -
Gso4g1764 482 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 43 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1764 Gso-Chr4 47757885 47766062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1764 - - gmx:100818229 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1764 4 47757885 47766062 Gso6g1317 6 12905054 12915228 GST