Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1286 ATGGACCCTCACCGCCGGCACCGCCGCCGCACGTGGTGCTGCTCCTTCGCCTTCCCTCCCTCCAGCCCCGACAACCTTAATAGCAACTCCTCCAAACCTGCATTCTCCCTCCCAACCTCCCCCAAATCCCGCATCCCCGTTAAGATCGACCCTCGCCGGATCCTCTCCCCGGGAAGAGTCTCCCCCATCGACTCCGATTCCGTCGCCGGGGAACCTCTCCCCTTTCCCCCTCCCTCGACGGAGTTGCCGCGGCCGCGATCTCCGGCGGCGACCTGCGAGAATAGGGACGTGAGGATGAGCCTTAGAGGGAATAACGGAGGGTGCATGGTTCTGGAAGTGAACTCGGAAGTTCTCTGCGCGAATTCGGAAGTGTTCGCGGGGTTGATAGAGGATTACAAGAAAGGGTCTTGGAGTGGGAGTGGGAGTGGGAGCAACAAAATGTGTAGAATAGAGGTTCCTGAAGTCGATAACTTGGGAGTGTTCAGAGAAACCATTGAGCTTATGTTCGAAAACGAGGATGGCGTCACAAAAAGGCTTCTTAACATTGGCGTTTTTCGATCCATTGACATTTTGGAGGTTTCAGCAGGCATCATGTTCACCAAGGGTGTTTTGTCTTGTTTACAATACCTTGAAGCTGTGCCTTGGACTGAAGAAGAAGAAGAAAAACTGAGAAGTCTATTCACAAGATTCAAGTTTGATGAAGCAACAACAAGAGACATCCTAGGAAGGCTTTACTTGCACGATTCAGTAGATTCTTCTTCCCAGCCTAATGTGGCTCGACAACTTGTATGGTCTATCACCACCTGTGTGGATAACAATGCAAGAAATGAACTAAAGACACTAGTGAAGGGTCTTCTTTGCAAAAGCTCAGTGTATGAGAAGAATCACCTTGACCTCAGCAAGGAGGATCTGTATTCTGTGTGCCACTCATGTCTGGACACATTGATAAGCCTCTTTGAGGAGGCATCTGACACTGAAAGGTTGACAAAGAAAGATAAGAATAAGCCATTGATCGAACGCATCTCAAGACAGGTTGATAACATCAACTGGTTGTTGGAAATCATGCTTGATGGGCAAATAGCAGAGGACTTTGTGAACATATGGACGGATCAGCACCAACTTATCAAAATGCATGAAAATGCATCCCCTATGGTTAGATATGAACTAAGTCGCGTGTCAGCGATTCTCTTTGTTGCCATGGCTACCAGAAAATTGCAATGTCGGTTGGAAGCTCGATCGGGGCTTCTTCAGGCATGGTTCCGGCCTATGCTTTTGGACTTTGGTTGGCTTCAGAGATGTAGAAGAGGGCTTGATATAAAGGTCTTGCAAGAGGCTATGGGTCAAACACTTCTTACTCTACCTCTAAATCAACAATATATGCTCTTCATGGAATGGTTTAGGTATTTCTCAAGCCATGGTACTGAATGTCCGAATCTAAGCAAGGCATTCCAAATTTGGTGGCGCAGATCTTTCTTAAGAGGCTCTGAAACTGATGCCATTGAAACAAGGTAA 1512 0.4782 MDPHRRHRRRTWCCSFAFPPSSPDNLNSNSSKPAFSLPTSPKSRIPVKIDPRRILSPGRVSPIDSDSVAGEPLPFPPPSTELPRPRSPAATCENRDVRMSLRGNNGGCMVLEVNSEVLCANSEVFAGLIEDYKKGSWSGSGSGSNKMCRIEVPEVDNLGVFRETIELMFENEDGVTKRLLNIGVFRSIDILEVSAGIMFTKGVLSCLQYLEAVPWTEEEEEKLRSLFTRFKFDEATTRDILGRLYLHDSVDSSSQPNVARQLVWSITTCVDNNARNELKTLVKGLLCKSSVYEKNHLDLSKEDLYSVCHSCLDTLISLFEEASDTERLTKKDKNKPLIERISRQVDNINWLLEIMLDGQIAEDFVNIWTDQHQLIKMHENASPMVRYELSRVSAILFVAMATRKLQCRLEARSGLLQAWFRPMLLDFGWLQRCRRGLDIKVLQEAMGQTLLTLPLNQQYMLFMEWFRYFSSHGTECPNLSKAFQIWWRRSFLRGSETDAIETR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1286 503 MobiDBLite consensus disorder prediction 18 90 - -
Gso6g1286 503 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 4 502 IPR038920 -
Gso6g1286 503 MobiDBLite consensus disorder prediction 18 38 - -
Gso6g1286 503 PANTHER OS04G0278000 PROTEIN 4 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1286 Gso-Chr6 12558962 12561849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1286 - - gmx:100806876 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1789 4 48109156 48111831 Gso6g1286 6 12558962 12561849 GST
Gso5g1627 5 39607100 39610235 Gso6g1286 6 12558962 12561849 PCT
Gso5g1788 5 41134924 41138526 Gso6g1286 6 12558962 12561849 PCT
Gso8g0146 8 1360557 1364229 Gso6g1286 6 12558962 12561849 PCT
Gso6g1286 6 12558962 12561849 Gso5g1627 5 39607100 39610235 PCT