Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1788 ATGGCAACCCTCGAAGTCCAAAAGCAGCCCAAACGACCCAAGTATCGGGAAAGCAGCGTCTCTCCCTCTGTAAACCCGCAGCGGCGCACTCCCGAGGCCGAATCTCCCTCCAGCTACAGCCACAGGACCCGCTTCTCTCCAATAATGGACTTTTTTCATTCTTCTTCTCCCACATCCAACCATGACTCTTTCCCTTCTAGCTTCTCCAAGTTCAACTCCGCCCTCACCGCTGGCCTCTTAAACCCATTGTCCCCCCCTCCCGACAAGACCCGATCCAGCCCTACCCTCTTCGAAATCATGGCCAGCGAGCCCGACGTCCCCCACAGGCCCACCCCTCTCATCCCTCCAACCCCCAACCCCTACCCCAACAAGCCCCTTATTCTTGATCCTCATGCCCTCTTGATGCAGCGCATATCCGAGCTCCTTGTTTCTCGCAGCCCCGGTAATCAGTTCAACGACGCCGTTTCCAGCGACATCAAGCTCACTCTCACCTCCAAAGACGGTACTTGTGTCTCCATGAACTTGCATCGCCAAATCCTCGTTGCTCACAGTAGATTCTTCTCTGTCAAGCTCTCCGATCGCTGGACCAAGCACCAGCAGGAGCTGCAGCGCTCCCCGGTGCCCTACGAAGTTGAAATCGCCGACTGCGACGATGTTGAGGTTTACATTGAGACTTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCCGAGTTCTCGGCATTTTAAAGGTTTCAGCTGCGATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCGCCATGGGCGGAGGATGAGGAGGAGAAGGTGGCATCGCTCCTGTCTGAGCTTCGTCTTGAAGCAGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCGACTGGTGTTGCCAATGGAAATGAAGAGGGGAGTGATAACGAGGAGGTTCTACTTAAGCTTATTCGTGTGGTTCTTGAAGGGAAGGATGAGAAGGCCAGGCGCGAGATGAAAGGGTTAGTTTCGAAGATGCTGCGTGAGAATTCTTCTCAGAGTGATCTTCGGAAAGAGTCATTGTACTTGGCATGTGACGATTGCCTGCAGTTACTTCGTCACCATTTTTTGCAGGCTGTGGCTTCGGATATGCAGGATTTGAGTCAAATTGCAAGGCAAGCAGATAATTTGCATTGGATTTTGGATATTTTAGTTGACAGACAGATTGCCGAGGATTTCCTCAAGACGTGGGCATCTCAGTCAGATTTAGCTGAAGCTCATTCTAAAGTGCCGGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACAGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAATTGTTGGCTTCTAAAGATGTAAGGTGTTTGCTTCTAAAAACTTGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCCAAGGGGCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACGATTCTCACTCTGCCGCTCCCCTGTCAACAGGATATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACGGACAAGACAATTTCGAATTGCAACTACATCAGTTGAGAACCCTTGA 1695 0.4991 MATLEVQKQPKRPKYRESSVSPSVNPQRRTPEAESPSSYSHRTRFSPIMDFFHSSSPTSNHDSFPSSFSKFNSALTAGLLNPLSPPPDKTRSSPTLFEIMASEPDVPHRPTPLIPPTPNPYPNKPLILDPHALLMQRISELLVSRSPGNQFNDAVSSDIKLTLTSKDGTCVSMNLHRQILVAHSRFFSVKLSDRWTKHQQELQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTGVANGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQSDLRKESLYLACDDCLQLLRHHFLQAVASDMQDLSQIARQADNLHWILDILVDRQIAEDFLKTWASQSDLAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLPCQQDILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQFRIATTSVENP* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1788 564 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 49 562 IPR038920 -
Gso5g1788 564 MobiDBLite consensus disorder prediction 1 41 - -
Gso5g1788 564 PANTHER OSJNBA0011J08.25 PROTEIN 49 562 - -
Gso5g1788 564 MobiDBLite consensus disorder prediction 16 41 - -
Gso5g1788 564 ProSiteProfiles BTB domain profile. 157 238 IPR000210 GO:0005515
Gso5g1788 564 Gene3D Potassium Channel Kv1.1; Chain A 139 272 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1788 Gso-Chr5 41134924 41138526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1788 - - gmx:100818782 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1788 5 41134924 41138526 Gso8g0146 8 1360557 1364229 GST
Gso5g1788 5 41134924 41138526 Gso4g1789 4 48109156 48111831 PCT
Gso5g1788 5 41134924 41138526 Gso6g1286 6 12558962 12561849 PCT