Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1281 ATGGTAAGCAGAGGCTCGTACAGCTCTAGCAGCCTCTTGACTGGTAGATTTCATGCTAGAAAGCTATCTCCTAGCATTATCACTTTCTACACCATGTTCATATTTGCTTTCTCCATCTTCATGTTCTTTTTCTACGTGAGACACATCAGTGTTGATGAAGATCCACCACTCCCTCTGCTTTCTCAACAATCTAAATCTCATCAGGTGCCAGAGTTACCTGTACACTATAAACAACTTTGGGATACCCCGTTCAATCATGGCTTACACCAATGTGTCAAGCCGACTACTAAATATAAAGCTGCCCAAGGATTTGATCGCTATCTAACCGTGAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTAGTCATACCTCAATTGGATAAGCGTTCATTCTGGAACGACTCTAGTGTGTTTTCAGATGTATTTGATGAGCTTCATTTCATCGAATCCCTGAAAGGAGATATCAGGATTGTTAGTGAGCTTCCCAAAAACTTGGAAGGTGTCCCCCGGGCCAGGAAACACTTTACTTCCTGGTCTGGAGTTGGTTACTATGAAGAGATGACAAGATTATGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGATGTCGTGCAATGTATCATGCACTTCGATTTTCTCCTCCTATAGAGAATTTGGGAAAGAGGTTGGTGGATCGGCTGAGATCACATGGAGGAAGATATATAGCTCTCCATCTGAGATATGAGAAAGATATGCTGTCTTTTACTGGTTGTGCATATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCAACAGAACAGAGAATTGGAGGATTTTGTCCATTGACTCCAAAGGAGGTGGGCATTTTTCTTCATGCTCTTGGTTATCCCCCATCTACACCAATATACATTGCAGCAGGAGTGATCTATGGTGGTAATACTCATCTTTCAGAGCTCTCATCCCGCTTCCCTAGTATAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTTGCCAATCATGCCTCCCAAACTGCTGCACTTGATTACATAATCTGTGTAGAGAGTGATGTATTTGTTCCGTCATATTCAGGAAATATGGCGAGAGCAGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATCAACCCAGACAGGAAAGGACTTGTTGGAATTTTTGATATGCTGGAAACTGGAGAGCTAGTAGAAGGAAGGGAACTGTCAAATATGGTGCAGCGCATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCACGGTTCTCTACCGGGGATTAAAGGCCGAGCACGATTTAGGACTGAAGAGCCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTAGAAATAACATAA 1533 0.4194 MVSRGSYSSSSLLTGRFHARKLSPSIITFYTMFIFAFSIFMFFFYVRHISVDEDPPLPLLSQQSKSHQVPELPVHYKQLWDTPFNHGLHQCVKPTTKYKAAQGFDRYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWNDSSVFSDVFDELHFIESLKGDIRIVSELPKNLEGVPRARKHFTSWSGVGYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALRFSPPIENLGKRLVDRLRSHGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRENTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGVIYGGNTHLSELSSRFPSIIFKESLATPEELKDFANHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFDMLETGELVEGRELSNMVQRMHKNRQGAPRKRHGSLPGIKGRARFRTEEPFYENPYPECICGSKSKLEIT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1281 510 CDD O-FucT_plant 107 428 IPR024709 -
Gso6g1281 510 PIRSF UCP009360 3 504 IPR024709 -
Gso6g1281 510 Gene3D - 247 431 - -
Gso6g1281 510 Pfam GDP-fucose protein O-fucosyltransferase 107 422 IPR019378 -
Gso6g1281 510 PANTHER O-FUCOSYLTRANSFERASE 38 8 505 - -
Gso6g1281 510 PANTHER OS02G0726500 PROTEIN-RELATED 8 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1281 Gso-Chr6 12507579 12518704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1281 76 501 Miscellaneous Gene Families AT1G22460 58.782 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1281 - - gmx:100810961 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1793 4 48143061 48152099 Gso6g1281 6 12507579 12518704 GST