Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1793 ATGGTAAGCAAAGTCTCGTACAGGTCCAGCAGCCTCTTGACTGGTAGATTTCATGCTAGAAAGCTATCTCCTAGCATTATCACTTTCTACACCATGTTCATATTTTCTTTCTCCGTCTTCGTCTTGTTCTACGTGAGACACATCAGTGTTGATGAAGATCCACCACACCCTCTGCTTTCTCAACAATCTAAATCTCACCAGGTGCCAGAGTTACCTGTGCACTATAAGCAACTTTGGGATACTCTGTTCAATCATGGCTTACACCAATGTGTCAAGCCGACTACTAAATATAAAGCTGCCCAAGGATTTGATCGCTACCTAACTGTGAGAAGTAATGGTGGACTAAATCAAATGCGCACTGGTATATCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTAGTCATACCTCAATTGGATAAACGCTCATTCTGGAAAGACTCTAGTGTATTTTCAGATGTATTTGATGAGTTTCATTTCATCGAATCCCTGAAAGGAGATATCAGGATTGTTAGTGAGCTTCCCAAAAACTTGGAAGGTGTCCCCCGGGCCAGGAAACACTTTACTTCCTGGTCTGGAGTCGGTTACTATGAAGAGATGACAAGATTATGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTGGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGATGCCGTGCGATGTATCATGCACTTCGATTTTCTCCTCCTATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACACGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGCTTTCTTTTACTGGTTGTGCATATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCAACAGAACAGAGAGTTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTGGGCATTTTTCTTCATGCTCTTGGGTATCCCCCATCTACACCAATATACATTGCAGCAGGAGAGATCTATGGTGGTAATACTCATCTTTCGGAGCTCTCATCCCGCTACCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTTGCCAATCACGCTTCCCAAACTGCTGCACTTGATTACATAATCTGTGTAGAGAGTGATGTATTTGTTCCATCATATTCAGGAAATATGGCAAGAGCAGTTGAGGGGCACCGCAGATTCTTAGGTCACCGCAAGACAATCAACCCAGACAGGAAAGGACTTGTTGGAATTTTTTATATGCTGGAAACTGGAGAGCTAGAAGAAGGAAGGGAACTATCAAATATGGTGCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCACGGTTCTCTACCGGGAATTAAAGGCCGAGCACGATTTAGGACTGAAGAGCCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTAGATATAACATGA 1530 0.4222 MVSKVSYRSSSLLTGRFHARKLSPSIITFYTMFIFSFSVFVLFYVRHISVDEDPPHPLLSQQSKSHQVPELPVHYKQLWDTLFNHGLHQCVKPTTKYKAAQGFDRYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWKDSSVFSDVFDEFHFIESLKGDIRIVSELPKNLEGVPRARKHFTSWSGVGYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALRFSPPIENLGKRLVDRLRSHGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRENTNYWKVKKINSTEQRVGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGEIYGGNTHLSELSSRYPNLIFKESLATPEELKDFANHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFYMLETGELEEGRELSNMVQRMHKNRQGAPRKRHGSLPGIKGRARFRTEEPFYENPYPECICGSKSKLDIT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1793 509 CDD O-FucT_plant 106 427 IPR024709 -
Gso4g1793 509 Gene3D - 243 430 - -
Gso4g1793 509 PANTHER OS02G0726500 PROTEIN-RELATED 9 504 - -
Gso4g1793 509 PIRSF UCP009360 3 503 IPR024709 -
Gso4g1793 509 Pfam GDP-fucose protein O-fucosyltransferase 106 421 IPR019378 -
Gso4g1793 509 PANTHER O-FUCOSYLTRANSFERASE 38 9 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1793 Gso-Chr4 48143061 48152099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1793 75 500 Miscellaneous Gene Families AT1G22460 58.548 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1793 - - gmx:100778847 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1793 4 48143061 48152099 Gso6g1281 6 12507579 12518704 GST