Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1258 ATGGTGCCGCAACCCATTTTGCATCTAACCCTTTTGTCATTAATAATCTCTCTGACCACTCTTTCCTTGGTCGATGCCGCCGATCCCACATTTGGCTTCACCCCTCTTGGATTATCTAGTAGCTCAAACTTGCAAATCCAAAAGCCTTACGACGTTGCAGTCAACGAGCGCTACAGCTTTTCAAATGGAGTGCACAGATTTTGGGTATACTCCACGGACAAGCCTCATATGCAAGGCAGCAATACGAAGCCACGAACTGAGATTCGTATCGCTGGATACGATTATACATCCGGTGTGTGGCAATTTCAAGGGTTTTTTTACGTGCCTAGTGGCACAAGCGGGGTGTGCATCCAGCAAGTGTTTGGTGGAGTAACTTCTGCCACAACCTCGCAGACTAGGGTCTATGGTGGTTCTCTCACTCATTACCAATCACCTACTCTGGAACCAAACATCTATAATAGGTGGATCCGGTTTAACGTGATCCATGATGTGGGTGCCAACAATGTGAAGATTTTTCTTAATGGGGAGGATAATCCCAGGTACAATGGACCTGGCCGTGGAGCCAGCACTCACTACTTCAAGTTTGGGGTTTACGCACAGGATGGTGCTTCCAACTACATGGAATCTCGTTGGAGGGATATCCAGATTTTTAAAAAATAG 660 0.4652 MVPQPILHLTLLSLIISLTTLSLVDAADPTFGFTPLGLSSSSNLQIQKPYDVAVNERYSFSNGVHRFWVYSTDKPHMQGSNTKPRTEIRIAGYDYTSGVWQFQGFFYVPSGTSGVCIQQVFGGVTSATTSQTRVYGGSLTHYQSPTLEPNIYNRWIRFNVIHDVGANNVKIFLNGEDNPRYNGPGRGASTHYFKFGVYAQDGASNYMESRWRDIQIFKK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1258 219 Gene3D - 36 218 - -
Gso6g1258 219 PANTHER ALGINATE LYASE 15 219 - -
Gso6g1258 219 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 15 219 - -
Gso6g1258 219 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 207 IPR013320 -
Gso6g1258 219 Pfam Alginate lyase 42 217 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1258 Gso-Chr6 12258438 12260069 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1258 - - gmx:547636 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1816 4 48394533 48395576 Gso6g1258 6 12258438 12260069 GST