Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1816 ATGGTGCCGAAACCCATTTTGTGTGTAACCCTTTTGTCATTAATAATTTCTCTGACCACTCTTTCCTTGGTTGCCGCCGATCCCACATATGGCTTCACCCGTCTTCCACTAAGTAACTCAAACTTCCAAGTCCAAAGGCCTTACGACGTTCCAGTCAGCCAACGCTACAGCTTTTCAAATGGAGTGCACAGATTTTTGGTATACTCCTCGGACAAGCCTCACATGCAAGGCAGTGCAACGGAGCCACGAACTGAGATTCGTATCACTGGATACGATTATACATCTGGTGTGTGGCAATTTGAAGGGTATTTTTACGTGCCTAGTGGCACAACCGGGACGTGCATCCAACAAGTGTTTGGTGGAGTATCCTCAGCCACAACCTCGCAGAGTAGAGTCTATGGTGGTTCTCTCACTCATTACCAATCGATTACACTGGAACAAAACATCTACAATAGGTGGATTCGGTTTAACGTGATCCATGATGTGGGTGCTAACAACGTGAAGATTTATATTAATGGGGGGAATACTCCCAGGTACAATGGACCTGGCCGTGGAGCTAGCACTCACTACTTCAAGTTTGGGGTTTATGCACAACCTGGTGCTGCTTCCAACTACATGGAATCTCAATGGCGGGATATCAAGATTTTAAGAAAATAG 657 0.4581 MVPKPILCVTLLSLIISLTTLSLVAADPTYGFTRLPLSNSNFQVQRPYDVPVSQRYSFSNGVHRFLVYSSDKPHMQGSATEPRTEIRITGYDYTSGVWQFEGYFYVPSGTTGTCIQQVFGGVSSATTSQSRVYGGSLTHYQSITLEQNIYNRWIRFNVIHDVGANNVKIYINGGNTPRYNGPGRGASTHYFKFGVYAQPGAASNYMESQWRDIKILRK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1816 218 Pfam Alginate lyase 40 215 IPR014895 -
Gso4g1816 218 PANTHER ALGINATE LYASE 9 218 - -
Gso4g1816 218 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 9 218 - -
Gso4g1816 218 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 207 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1816 Gso-Chr4 48394533 48395576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1816 - - gmx:100791107 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1816 4 48394533 48395576 Gso6g1258 6 12258438 12260069 GST