Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1235 ATGTCGTGGTCCTCTGGTTCAGAATCAGAAGAGTCAGCGAGCCCCAACAACCTAATCCCGTCCCTCCCAGACGACGTCGCATTGAACTGCCTAGGACGCATCCCTCGGTCCCAGCACCCAACCCTCTCCCTGGTCTCCAAACCCATCCGCACCCTCCTCTCTTCCCCAATCCTCTTCACCACGCGAACCCTCCTCCAATGCACCCAACCCCTCCTCTACCTCACTCTCCGCTCACGCCACTCCTCTCTCCTCCAATTCTTCACGCTCCACCGCACAAACCCTAATAACCCCCTCCTCGCTCCCCTTCCCCCGATCCCCTCCCCCGCCGTCGGCTCCGCCTACGCCGTCCTCGGCCCCACCATCTACGTCCTCGGCGGCTCCATCCACGACGTCCCCTCCCCCAACGTCTGGCTCCTCGACTGCCGCTTCAACCGCTGGCTCCGCGGTCCCTCCATGCGCGTCGGCCGCGAATTCGCCGCCGCGGGAGTCCTCCACGGCAAGATCTACGTCCTCGGCGGCTGCGTCGCTGACACCTGGTCCCGCTCCGCCAATTGGGCGGAGGTCCTCGACCCCGCCACTGGCCAATGGGAGAGGGTCGCCAGTCCGACGGAGGTCCGTGAGAAGTGGATGCACGCCAGCGCCGTCGTCGGGGAGCGGATCTACGCGATGGCAGATCGCGGTGGCATCGCCTACGAGCCTAGCAGCGGCGCGTGGGAGAGCGTGGGGGTAGAATTGGACCACGGGTGGAGGGGGAGGGCGTGCGTGGTGGAAGGGATTTTGTACTGCTACGATTATTTGGGGAAAATCAAAGGGTTCGATGTGGGGCGCGGGGTGTGGGAGGAGTTGAAGGGGTTGGAGAAGGGTTTGCCCAGGTTTCTGTGTGGGGCTACCATGGCTGATTTGGGTGGGAAATTGTGTGTGGTTTGGGAGTGCCAGGGGAATGAGAATGAAATGGAGATTTGGTGCGCTGAGATTGGAGTGAAGAAGAATTCGGATGGGGAATTGTGGGGTCAACTTGTTTGGTTCGGGAAGGTTCTTTCTGTTCCCAAAGGCTCTTCCATTGTCAACTGTTCTTCTGTTTCCTTGTGA 1089 0.6116 MSWSSGSESEESASPNNLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILFTTRTLLQCTQPLLYLTLRSRHSSLLQFFTLHRTNPNNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIHDVPSPNVWLLDCRFNRWLRGPSMRVGREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPATGQWERVASPTEVREKWMHASAVVGERIYAMADRGGIAYEPSSGAWESVGVELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNENEMEIWCAEIGVKKNSDGELWGQLVWFGKVLSVPKGSSIVNCSSVSL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1235 362 MobiDBLite consensus disorder prediction 1 19 - -
Gso6g1235 362 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g1235 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 7 345 - -
Gso6g1235 362 Gene3D - 63 333 IPR015915 GO:0005515
Gso6g1235 362 Pfam Kelch motif 158 202 IPR006652 GO:0005515
Gso6g1235 362 Pfam Kelch motif 109 153 IPR006652 GO:0005515
Gso6g1235 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 7 345 - -
Gso6g1235 362 SMART kelc_smart 167 219 IPR006652 GO:0005515
Gso6g1235 362 SMART kelc_smart 120 166 IPR006652 GO:0005515
Gso6g1235 362 SUPERFAMILY Kelch motif 72 343 IPR015915 GO:0005515
Gso6g1235 362 SUPERFAMILY F-box domain 12 95 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1235 Gso-Chr6 12025769 12027269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1235 22 346 Miscellaneous Gene Families AT4G33900 37.500 5.25e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1235 - - gmx:100795539 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1836 4 48619261 48621508 Gso6g1235 6 12025769 12027269 GST