Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1234 ATGGCTCTGCTGGCATTGAACATCTCAGTGTGTTGTTTCCAACAGCAGCGTTCCCCCACTCTCTTCAAACCCACCATTACCAAACAAACCCTCTCCCTCCCCACCGCTTCCGCTTTCTCTTCCTCTTCCTTAACTCAACTCAGCGTGGGCCAATATTTACCCGCCAACTACGGCGATTGGGTTCCCAACCCCGACCCGGAGCTTCGCAGAAGATGCGGCATTCTGCTCCATCCGACGTCGTTTCGCGGCCCCTACGGAATTGGCGATCTTGGCGACGAGGCCTTCCGTTTCATCGACTGGCTCCACCACTCGGGTTGCTCCGTTTGGCAGGTTCTTCCCCTCGTGCCACCTGGCAGAAAGGCCAACGAAGAAGGATCCCCTTACTCTGGCCAGGATGCGAATTGTGGCAACACGCTCTTGATCTCTCTTCAAGGCCTCGTCGAGGATGGGTTGTTGGAAAAACACGAGCTTCCTCAACCAATTGATGCAGAGCGCGTGAATTTTTCACTTGTTGCTGATGTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTCGTCGGGACCCTGACATATCAAGCTGGCTTGAAGATGCAGCCTATTTTGCTGCTATTGACGACAGTTTAAACACAATCAGCTGGTACAATTGGCCTGAACCTTTAAGAAATCGCCATCTTGTAGCTCTAGAAGATATTTACCAACAAAAGCGAGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTTCAAAGGCAGTGGCAGAAAGTTCACAGCTATGCACAGAGTAAGGGAATCAGCATAATGGGAGACATGCCAATATATGTTGGTTATCATAGCGCAGATGTTTGGGCAAATAAGAAACAGTTTTTACTGAACAGGAAGGGCTTTCCTCTTTTAGTTAGTGGTGTTCCTCCTGACGCATTCAGTGAAACCGGCCAGCTCTGGGGCAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGATGGATACTCGTGGTGGGTACGTCGCATACGACGTGCACAAAATTTATTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCAGGATATTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGCTTGGAAAGTGGAAGGTAGGACCTGGAATATCCTTATTTGATACCATTTTCAGAGCTGTTGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAATTTGGGTTTGGAGGTGATGCTAATAACCCTCATTTGCCTCATAATCATGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATTGGAGGTTGGTGGGAAGTTTTGAACCAAGAAGAGAAATCCAATGTACTACGTTATCTTTCATTAAATGAGGGAGATGACATTCCATGGGCGCTAATCCAGAGAGTATTGGCTTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGTAATTCTGCCAGGATGAATATTCCCGCAACTCAGTTTGGAAACTGGGGTTGGAGAATTGCAAGTTCGGTGAGCTTTGATGGCTTGGAGAGAGAGGCAGACAGACTCAGAGAAATGCTTTCAATGTATGGCCGACTTTGA 1707 0.4628 MALLALNISVCCFQQQRSPTLFKPTITKQTLSLPTASAFSSSSLTQLSVGQYLPANYGDWVPNPDPELRRRCGILLHPTSFRGPYGIGDLGDEAFRFIDWLHHSGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLQGLVEDGLLEKHELPQPIDAERVNFSLVADVKDPLITKAAERLISSEGELKTQLENFRRDPDISSWLEDAAYFAAIDDSLNTISWYNWPEPLRNRHLVALEDIYQQKRDFINVFIAQQFLFQRQWQKVHSYAQSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGYSWWVRRIRRAQNLFDEFRIDHFRGFAGYWAVPSEAKVAMLGKWKVGPGISLFDTIFRAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGGDANNPHLPHNHECNQVVYTGTHDNDTIGGWWEVLNQEEKSNVLRYLSLNEGDDIPWALIQRVLASVAQTAIIPMQDVLGLGNSARMNIPATQFGNWGWRIASSVSFDGLEREADRLREMLSMYGRL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1234 568 Pfam 4-alpha-glucanotransferase 76 543 IPR003385 GO:0004134|GO:0005975
Gso6g1234 568 SUPERFAMILY (Trans)glycosidases 49 567 IPR017853 -
Gso6g1234 568 TIGRFAM malQ: 4-alpha-glucanotransferase 68 553 IPR003385 GO:0004134|GO:0005975
Gso6g1234 568 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 30 568 IPR003385 GO:0004134|GO:0005975
Gso6g1234 568 Gene3D Glycosidases 67 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1234 Gso-Chr6 12018510 12024416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1234 25 568 Glycoside Hydrolase AT5G64860 72.243 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1234 K00705 - gmx:100795007 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1837 4 48621673 48626839 Gso6g1234 6 12018510 12024416 GST