Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1837 ATGGGTCTGGCATTGAACATCTCAGTGTGTTGTTTCCCACAGCAGCGTTGCCCCACTCTCTTCAAACCCACCATTACCAAACAAACCCTCTCCTTCCCCACCGCTTCCGCTTTCTCCTCCGTAACTCAACTCAGCGTGGGCCAGGATTTACCCGCCAACTACAGCGATTGGGTTCCCAGCCCCGACCCCGGGCTTCGCAGAAGATGCGGCATTCTGCTCCACCCGACGTCGTTTCGCGGCCCCTACGGCATCGGCGATCTCGGCGACGAGGCGTTCCGTTTCATCGACTGGCTCCACCACTCGGGTTGCTCCGTCTGGCAGGTTCTTCCTCTCGTGCCACCTGGCAGAAAGGCCAACGAAGAAGGATCCCCTTACTCTGGCCAGGATGCGAATTGTGGCAACACGCTCTTGATCTCTCTTGAGGGCCTCGTCGAGGATGGGTTGTTGGAAAAACACGAGCTTCCTCAACCAATTGATGCAGGGCGGGTTAATTTTTCACTCGTTGCTGATCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTCGAAGGGATCCTGACATATCATGTTGGCTTGAAGATGCAGCCTATTTTGCTGCTATTGACGATAGTTTAAACACAATCAGCTGGTACAGTTGGCCTGAACCTTTAAGAAATCGACATCTTGTAGCTTTAGAAGATATTTACCAACAAAAGCGAGATTTTATAAATGTATTTATTGCCCAACAGTTCCTGTTTCAAAGGCAGTGGCAGAAAGTTCACAGCTATGCACAGAGTAAGGGAATCAGCATAATGGGAGACATGCCAATATATGTTGGTTATCATAGCGCAGATGTTTGGGCAAATAAGAAACAGTTTTTACTGAACAGGAAGGGCTTTCCTCTTTTAGTTAGTGGTGTTCCTCCTGACGCATTCAGTGAAACTGGTCAGCTTTGGGGCAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGATGGATACTCATGGTGGGTACGTCGCATACGACGTGCACAAAATTTATTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATATTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGCTTGGAAAGTGGAAGGTAGGACCTGGAATATCCTTATTTGATGCCATTTTCAGAGCTGTTGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAGGTGGTGCTAATAACCCTCATTTGCCCCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATTGGAGGTTGGTGGGAAGCTTTGAACCAAGAAGAGAAATCCAATGTACTAAGTTATCTTTCATTAAATGAGGGAGATGAAATTTCATGGGCGCTAATCCAGAGAGTATTGGCTTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGATTGGGTAATTCTGCCAGGATGAATATTCCCGCAACTCAGTTTGGAAACTGGGGTTGGAGAATTGGAAGTTCGGTGAGCTTTGATGGCTTGGAGAGAGAGGCAGACAGACTCAGAGAAATGCTTTCAATGTATGGCCGACTTTGA 1698 0.4658 MGLALNISVCCFPQQRCPTLFKPTITKQTLSFPTASAFSSVTQLSVGQDLPANYSDWVPSPDPGLRRRCGILLHPTSFRGPYGIGDLGDEAFRFIDWLHHSGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEGLVEDGLLEKHELPQPIDAGRVNFSLVADLKDPLITKAAERLISSEGELKTQLENFRRDPDISCWLEDAAYFAAIDDSLNTISWYSWPEPLRNRHLVALEDIYQQKRDFINVFIAQQFLFQRQWQKVHSYAQSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGYSWWVRRIRRAQNLFDEFRIDHFRGFAGYWAVPSEAKVAMLGKWKVGPGISLFDAIFRAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGGGANNPHLPHNHECNQVVYTGTHDNDTIGGWWEALNQEEKSNVLSYLSLNEGDEISWALIQRVLASVAQTAIIPMQDVLGLGNSARMNIPATQFGNWGWRIGSSVSFDGLEREADRLREMLSMYGRL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1837 565 TIGRFAM malQ: 4-alpha-glucanotransferase 66 549 IPR003385 GO:0004134|GO:0005975
Gso4g1837 565 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 34 565 IPR003385 GO:0004134|GO:0005975
Gso4g1837 565 Pfam 4-alpha-glucanotransferase 73 539 IPR003385 GO:0004134|GO:0005975
Gso4g1837 565 Gene3D Glycosidases 64 565 - -
Gso4g1837 565 SUPERFAMILY (Trans)glycosidases 47 564 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1837 Gso-Chr4 48621673 48626839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1837 26 565 Glycoside Hydrolase AT5G64860 73.112 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1837 K00705 - gmx:100785271 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1837 4 48621673 48626839 Gso6g1234 6 12018510 12024416 GST