Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1233 ATGGGCATAGAAATAGGATTAAAGACAATTAAAGTTCCGAAGATCCATCTTAAGCCGCAAAAGTCGAACAAAAGAAAAACCTCGACTTTCCCAAAACAAAACAAAACAAAACAAACCCATCCCTCCTTTCTTCTCTCTGCAGATGGCACTGATCTTGTCTTCATGCAGGTTCGTGAAAGCCAACCAATGGGAGAGCCAAGATCTTCTGCAACATCATCACCACCTCCGCCACCACCTCAACCACCACCAATCTCCCTCGTCCAACCCTCCCACAAAAAACGCCACAAACCCAAAGTCATCCGCGTCTTCCGCTCCGTCTTCCGTTCCCTCCCCATCATAACCCCCTCCTGCAAGTTCCCCATCGACCCCACCCACCACCACCACCAAAAAACCGTCGCCGCCGTCAACAACGCCGCAAAAATCTCCGGCACCCTATTCGGCCACCGAAATGGCCGCGTCAGCCTCTCCATCCAAGAAAACCCCCGCTGCCTCCCCTCCCTAGTCGTCGAACTCTCCATGCAAACAACCACTCTTCAAAAGGAAATGGCCGCGGGAATGGTGAGAATCGCGCTCGAATGTGAGAAGCGTTCGGAAAAAGACAAAACGAAGATCATCGAGGAGCCTCTATGGACGATGTATTGCAATGGAAAGAAGAGTGGTTACGGCGTGAGGAGAGAGGCGACGGAGGAGGACTTGCACGTGATGGAGCTTCTAAAGGCGGTGTCGATGGGTGCCGGCGTTCTTCCGGTTAGGGCTGACGTGGACGACGCCGATGGCGGGGGAGAGTTGGCGTACATGCGGGCACCGTTCGAGCACGTAGTGGGGTCCAGGGATTCTGAGACTCTGTATATGTTGAGTCCAGACCAGGGGAACAGTGGGCCCGATGTTACTATATTTTTTGTCAGGATTTGA 912 0.5285 MGIEIGLKTIKVPKIHLKPQKSNKRKTSTFPKQNKTKQTHPSFLLSADGTDLVFMQVRESQPMGEPRSSATSSPPPPPPQPPPISLVQPSHKKRHKPKVIRVFRSVFRSLPIITPSCKFPIDPTHHHHQKTVAAVNNAAKISGTLFGHRNGRVSLSIQENPRCLPSLVVELSMQTTTLQKEMAAGMVRIALECEKRSEKDKTKIIEEPLWTMYCNGKKSGYGVRREATEEDLHVMELLKAVSMGAGVLPVRADVDDADGGGELAYMRAPFEHVVGSRDSETLYMLSPDQGNSGPDVTIFFVRI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1233 303 PANTHER PROTEIN MIZU-KUSSEI 1 67 303 - -
Gso6g1233 303 PANTHER PROTEIN MIZU-KUSSEI 1 67 303 IPR006460 GO:0010274
Gso6g1233 303 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 142 303 IPR006460 GO:0010274
Gso6g1233 303 MobiDBLite consensus disorder prediction 14 31 - -
Gso6g1233 303 MobiDBLite consensus disorder prediction 14 96 - -
Gso6g1233 303 Pfam Protein of unknown function, DUF617 141 302 IPR006460 GO:0010274
Gso6g1233 303 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1233 Gso-Chr6 12016306 12017558 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1233 - - gmx:100792553 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1487 5 38292475 38293511 Gso6g1233 6 12016306 12017558 PCT
Gso8g1117 8 10243954 10244708 Gso6g1233 6 12016306 12017558 PCT
Gso6g1233 6 12016306 12017558 Gso5g1487 5 38292475 38293511 PCT
Gso6g1233 6 12016306 12017558 Gso8g1117 8 10243954 10244708 PCT