Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1487 ATGGCCAGTGGCGTGACTACAGTGGACTGCGAGAAACAAGTTAGATCATGGAGGCTGATACGTTCTCTCATGCAACTATTAATCCCCACATGTAACTGCGCCACCATTATAGAAGACGGCCAAGATGTAACAACAACAACAAACGAGACCCTCCGAAACACAAGCAAATATACTTATTCACCTTCATCGTCACTGATGAGCTCCACCACCAATATCACAGGCACGATCTTCGGATACCGCAGAGGAAAAGTGAGCTTCTGCATTCAGGCAAACGCCAACTCCACCAACCCAATTCTCCTCCTAGAGTTGGCAGTTCCAACAACCATCTTGGCCAAGGAAATGAGAGGAGGAACCCTAAGAATCGCCCTAGAGAGCGGCAACGACGACGATGACGGCGACGGCGACGGCCAAGTAGACACACTTTTGTCCACGCCTTTGTGGACTATGTACTGCAATGGGAGGAAGGTGGGGTATGCCGTTAAGCGCAGGCCCTCCAACACTGATTTCGAAGCGCTGAGGTTGATGCGTTCGGTGGTTGTCGGAACCGGGGTTATGAAGTGCAAAGAGTTAGTGAACAAAGAAGATGATCAACTTATGTACCTTAGAGCTAGCTTTCAGAGGGTTCGTGGCTCAGACAACTGTGAATCTTTCCACTTGATTGATCCAGAGGGAGACATTGATCAGGAACTCAGTGTTTTCTTTTTTAGGTCCAGGTGA 717 0.4881 MASGVTTVDCEKQVRSWRLIRSLMQLLIPTCNCATIIEDGQDVTTTTNETLRNTSKYTYSPSSSLMSSTTNITGTIFGYRRGKVSFCIQANANSTNPILLLELAVPTTILAKEMRGGTLRIALESGNDDDDGDGDGQVDTLLSTPLWTMYCNGRKVGYAVKRRPSNTDFEALRLMRSVVVGTGVMKCKELVNKEDDQLMYLRASFQRVRGSDNCESFHLIDPEGDIDQELSVFFFRSR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1487 238 PANTHER - 1 237 - -
Gso5g1487 238 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 72 237 IPR006460 GO:0010274
Gso5g1487 238 Pfam Protein of unknown function, DUF617 72 236 IPR006460 GO:0010274
Gso5g1487 238 PANTHER DUF617 FAMILY PROTEIN 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1487 Gso-Chr5 38292475 38293511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1487 - - gmx:100794628 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1487 5 38292475 38293511 Gso8g1117 8 10243954 10244708 GST
Gso5g1487 5 38292475 38293511 Gso6g1233 6 12016306 12017558 PCT
Gso6g1233 6 12016306 12017558 Gso5g1487 5 38292475 38293511 PCT