Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1220 ATGGGTGAGGGAGAACGTTTCCAGCTTGGGACGGTGGGCGCGTTGACTCTTTCTGTGGTCTCATCTGTGTCCATTGTGATTTGCAATAAGGCGCTGATGAGTTCACTGCATTTCATTTTCGCTACAACTTTGACCAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGTGGCGCTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATTGGATTTGGGATTTTAAATGGGATCTCAATTGGACTTTTAAATTTGAGCCTGGGTTTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGCAATCATTCCTTGTACTGTATTGTTGGAGACCATATTTCTTGGGAAGAGATTCAGTAAGAGAATTCAATTTGCCCTCAGTATCCTCCTTTTGGGTGTCGGGATTGCTACTGTCACAGATTTGCAGCTCAATGCTCTGGGCTCTTTCTTATCTTTTCTCGCAGTGATTACAACTTGTGTTGCTCAGATTATGACAAATACTATCCAGAAGAAGTACAAGGTTTCTTCCACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATTTCTGGCCCATATCTGGATAAACTTTTGACCAACCAAAATGTATTTGGTTTCAATTATACGACACAAGTGACGGTTTTCATAATTCTTTCCTGCCTTATCTCTATCTCGGTCAATTTCAGTACGTTCCTTGTTATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTATTGGCATTTGGTTATATACTTCTCCGAGACCCGTTTAGCTGGAGAAACATACTGGGTATTTTGATAGCCATGATTGGGATGATACTATATTCTTACTATTGCACTCTTGAGAATCAGCAAAAAACTGTCGAAGCTGCATCGCAATCATCCCAGGCAAGAGAAGATGAATCTGATCCTCTGATGAATGTGGAAAATGGAAGTGCAGTTGTGAGTTCTAATGTCGGACAAAGACAAATGTCTCCTGTATGGAGCAAGAGCAAAGACTAG 1056 0.4148 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVIGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETIFLGKRFSKRIQFALSILLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLISGPYLDKLLTNQNVFGFNYTTQVTVFIILSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLRDPFSWRNILGILIAMIGMILYSYYCTLENQQKTVEAASQSSQAREDESDPLMNVENGSAVVSSNVGQRQMSPVWSKSKD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1220 351 MobiDBLite consensus disorder prediction 331 351 - -
Gso6g1220 351 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 3 325 - -
Gso6g1220 351 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
Gso6g1220 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 294 - -
Gso6g1220 351 PANTHER SOLUTE CARRIER FAMILY 35 3 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1220 Gso-Chr6 11846021 11850115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1220 1 325 Organic Solute Cotransporters AT1G21870 24.706 2.40e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1220 K15285 - gmx:100786018 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1851 4 48787730 48791846 Gso6g1220 6 11846021 11850115 GST
Gso5g1583 5 39155432 39160225 Gso6g1220 6 11846021 11850115 PCT
Gso8g1212 8 11054775 11059664 Gso6g1220 6 11846021 11850115 PCT
Gso6g1220 6 11846021 11850115 Gso5g1583 5 39155432 39160225 PCT
Gso6g1220 6 11846021 11850115 Gso8g1212 8 11054775 11059664 PCT