Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1583 ATGTCTTCAGCAACCAAGGGTGATAGGAAGACTGCACTTGATGTGGCATCATGGATGTTCAATATAGTCACATCTGTGGGAATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCTTTCTTAAGTGGCTGGGATATGTCCAAACCTCTCACCTTCCCTTACCTGATCTCATCAAATTTGTCTTATTTGCAAATTTCTCTATTGTCGGCATGAACGTGAGTTTGATGTGGAATTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTATCTTGGATAATGTGCGATATTCAAGGGACACAAAACTTAGCATTTCTCTAGTTCTCCTTGGGGTTGCTGTATGTACAGTCACTGACGTGAGTGTCAATGCTAAGGGTTTTATAGCTGCTGCAGTGGCAGTTTGGAGCACCTCACTACAGCAGTATTATGTGCATTTTCTTCAGAGGAAGTACTCTCTTGGATCGTTTAACTTGTTGGGCCACACTGCACCAGTACAGGCAGCAAGTTTACTACTAGTAGGTCCCTTTTTGGACTATTGGCTGACAAACAAACGAGTTGACGCCTACAACTATGGTTTCACATCTACTTTGTTCATCATTATCTCTTGCACCATCGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGCAGGTTCACGGCTGTATCTTTCCAAGTCCTTGGACACATGAAGACTATTCTGGTACTGGCCTTAGGATTCGTTTTCTTCGGAAAAGAAGGCCTCAATTTACAAGTGATTCTGGGCATGACCATTGCCATAGCGGGAATGATATGGTATGGCAATGCATCTTCTAAGCCAGGAGGGAAGGAACGTCTTAGCTTACCCATTAACCATACCACCAACAAGACACAAGAGTATAATGTACTGCCAGTGTCCTCTGAAACGGATCAGGAAATATAG 1014 0.4329 MSSATKGDRKTALDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTVFLKWLGYVQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLVGPFLDYWLTNKRVDAYNYGFTSTLFIIISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLALGFVFFGKEGLNLQVILGMTIAIAGMIWYGNASSKPGGKERLSLPINHTTNKTQEYNVLPVSSETDQEI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1583 337 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Gso5g1583 337 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 7 314 - -
Gso5g1583 337 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1583 Gso-Chr5 39155432 39160225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1583 1 303 Organic Solute Cotransporters AT5G05820 24.516 6.37e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1583 - - gmx:100814890 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1583 5 39155432 39160225 Gso5g1583 5 39155432 39160225 ECH
Gso5g1583 5 39155432 39160225 Gso8g1212 8 11054775 11059664 GST
Gso5g1583 5 39155432 39160225 Gso4g1851 4 48787730 48791846 PCT
Gso5g1583 5 39155432 39160225 Gso6g1220 6 11846021 11850115 PCT
Gso4g1851 4 48787730 48791846 Gso5g1583 5 39155432 39160225 PCT
Gso6g1220 6 11846021 11850115 Gso5g1583 5 39155432 39160225 PCT