Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1060 ATGGCGGATTCTGAGCGAATCCAAAATCCGTGGATGGCTTCGGAGCAAACTGCAATTGAAATGAACGCCGATTCCAGGGAATGCTCTTCTCTTCCTCATCCGCCGCCGCTAAAATTATCTAATTCTGATCAATTGGGAATCGGAGCACGAGCTTTCTCCGCCGCCGGCGCCGCCTTCCTCTCCGCCATCATTGTCAATCCCCTCGACGTTGCCAAGACAAGGTTGCAAGCACAAGCGGCAGGGGTCGCGTATTCCCATCCACTCAGTAATATGACCAGTAGAATGGGTTGTTTTGGGCCAAATATGATATTTGCCGATTTAAGATGTTCACCATCATGCCACCGGGCTGGATTCCAGGGCACAGTGTCCATTTGTCCTCCTGAGTGTTTTCGCTACAAAGGAACACTAGATGTCATCTACAAAATTATAAAGCAGGAGGGATTTTCTAGGCTATGGAGAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATTTACCTTCCTTGCTATGACATACTCCGCAATTGGTTGGAGGAATTTACAGCTAAAAATGCACCAACCACAACTACTTATGTACCTCTAGTAGCTGGTTCATTGGCACGCTCTCTAGCTTGTGCTACTTGCTACCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGAGACTCAAATTGGTAAAAAGCCTCCTGGAGTGATCCAGACTCTGCTAGGTGTTGTCTCAAATGTCAAGAGCACAAACACGCCACAGAACAGCTTGCAAGGTTATCGTGTTTTGTGGACTGGCATGGGGGCTCAACTTGCCCGTGATGTACCCTTCTCTGCCATATGTTGGTCAACACTTGAACCAACTAGAAGAAAACTTCTTGGTTTGATTGGAGGTGATGATGCCAATGCATTGAGTGTTCTTGGGGCAAATTTTGGAGCTGGGTTTGTTGCAGGAACTTTAGCAGCTGGAGCCACATGTCCACTAGATGTTGCAAAAACTCGAAGGCAGATAGAGAGGGATCCTGTTAGGGCATTGAAAATGACTACAAGACAGACACTGATGGAGGTGTGGAGAGATGGAGGTTTGAAAGGATTGTTTACGGGTGTTGGTCCACGAGTTGGTCGAGCAGGCCCCTCCGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATTAG 1191 0.4694 MADSERIQNPWMASEQTAIEMNADSRECSSLPHPPPLKLSNSDQLGIGARAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVAYSHPLSNMTSRMGCFGPNMIFADLRCSPSCHRAGFQGTVSICPPECFRYKGTLDVIYKIIKQEGFSRLWRGTNAGLALAVPTVGIYLPCYDILRNWLEEFTAKNAPTTTTYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIGKKPPGVIQTLLGVVSNVKSTNTPQNSLQGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLGLIGGDDANALSVLGANFGAGFVAGTLAAGATCPLDVAKTRRQIERDPVRALKMTTRQTLMEVWRDGGLKGLFTGVGPRVGRAGPSVGIVISFYEVVKFVLHH* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1060 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 305 393 IPR018108 -
Gso6g1060 396 Gene3D Mitochondrial carrier domain 25 99 IPR023395 -
Gso6g1060 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 291 IPR018108 -
Gso6g1060 396 Gene3D Mitochondrial carrier domain 106 396 IPR023395 -
Gso6g1060 396 SUPERFAMILY Mitochondrial carrier 47 389 IPR023395 -
Gso6g1060 396 PANTHER BNACNNG35730D PROTEIN 38 395 - -
Gso6g1060 396 PANTHER FI19922P1-RELATED 38 395 IPR045315 GO:1990542
Gso6g1060 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 179 IPR018108 -
Gso6g1060 396 Pfam Mitochondrial carrier protein 309 394 IPR018108 -
Gso6g1060 396 Pfam Mitochondrial carrier protein 45 180 IPR018108 -
Gso6g1060 396 Pfam Mitochondrial carrier protein 192 292 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1060 Gso-Chr6 10284747 10290910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1060 141 392 Organic Solute Cotransporters AT3G55640 26.357 2.69e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1060 K15119 - gmx:100810960 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1998 4 50329955 50335241 Gso6g1060 6 10284747 10290910 GST