Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1998 ATGGCGGATTCAGAGCGAATCCAAAATTCGTGGATGGCTTCGGATCAAACTGCAATTGAAATGAGCGGCGAGGGCACAGGTTCCAGGGAATGCTCTTCTCTCCCTCCGCCGCCGCAAAAACCATTCAATTCTGATCAATTGGGAATCGGAGAACGAGCTTTCTCCGCCGCCGGCGCCGCCTTCCTCTCCGCCATCATTGTCAATCCCCTCGACGTTGCCAAGACAAGGTTGCAAGCACAAGCGGCAGGGGTCGCATATTCTCATCCACTCAGTAATATGACCAGTAGAATGGCTTGTTTTGGGCCAAATATGGGCACAGTGTCCATTTGTCCTCCCGAGTGTTTTCGCTACAAAGGAACACTAGATGTTATCTACAAAATTATAAAACAGGAGGGAATTTCTAGGCTATGGAGAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATATACCTTCCTTGCTATGACATACTCCGCAATTGGTTGGAGGAATTCACAGCTAAAAAGGCACCAACCACAACTACTTATGTACCTCTAGTAGCTGGTTCATTGGCACGCTCTCTAGCTTGCACTACTTGCTACCCTATTGAACTTGCTAAAACTCGTATGCAGGCATTTAAAGAGACTCAAATTGGTAAAAAGCCTCCTGGAGTGATCCAGACTCTGCTAGGTGTTGTTTCAAATGTCAAGAGCACAAACACTCCACAGAACAGCTTGCAAGGTTATCGTGTTTTGTGGACTGGCATGGGAGCTCAACTTGCCCGTGATGTACCCTTCTCTGCTATTTGTTGGTCGACACTTGAACCGACTAGAAGAAAACTTCTTGGTTTGATTGGAGGTGATGATGCCAATGCATTGAGTGTTCTTGGGGCAAATTTTGGAGCTGGGTTTGTTGCAGGAACCTTAGCAGCTGGAGCCACATGTCCGCTAGATGTTGTAAAAACTCGAAGGCAGATAGAGAGGGATCCTGTTAGGGCATTGAAAATGACTACAAGACAGACACTGATGGAGGTGTGGAGAGATGGAGGCTTGAAAGGATTGTTTACAGGTGTTGGTCCACGAGTTGGTCGAGCAGGCCCCTCTGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATCAGTACACATAA 1155 0.4684 MADSERIQNSWMASDQTAIEMSGEGTGSRECSSLPPPPQKPFNSDQLGIGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVAYSHPLSNMTSRMACFGPNMGTVSICPPECFRYKGTLDVIYKIIKQEGISRLWRGTNAGLALAVPTVGIYLPCYDILRNWLEEFTAKKAPTTTTYVPLVAGSLARSLACTTCYPIELAKTRMQAFKETQIGKKPPGVIQTLLGVVSNVKSTNTPQNSLQGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLGLIGGDDANALSVLGANFGAGFVAGTLAAGATCPLDVVKTRRQIERDPVRALKMTTRQTLMEVWRDGGLKGLFTGVGPRVGRAGPSVGIVISFYEVVKFVLHHQYT* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1998 384 PANTHER BNACNNG35730D PROTEIN 44 383 - -
Gso4g1998 384 MobiDBLite consensus disorder prediction 1 46 - -
Gso4g1998 384 SUPERFAMILY Mitochondrial carrier 50 374 IPR023395 -
Gso4g1998 384 Pfam Mitochondrial carrier protein 294 380 IPR018108 -
Gso4g1998 384 Pfam Mitochondrial carrier protein 177 277 IPR018108 -
Gso4g1998 384 Pfam Mitochondrial carrier protein 47 165 IPR018108 -
Gso4g1998 384 PANTHER FI19922P1-RELATED 44 383 IPR045315 GO:1990542
Gso4g1998 384 Gene3D Mitochondrial carrier domain 28 231 IPR023395 -
Gso4g1998 384 Gene3D Mitochondrial carrier domain 236 384 IPR023395 -
Gso4g1998 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 276 IPR018108 -
Gso4g1998 384 MobiDBLite consensus disorder prediction 1 33 - -
Gso4g1998 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 164 IPR018108 -
Gso4g1998 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 378 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1998 Gso-Chr4 50329955 50335241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1998 89 377 Organic Solute Cotransporters AT3G55640 25.424 4.56e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1998 K15119 - gmx:100778501 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1998 4 50329955 50335241 Gso6g1060 6 10284747 10290910 GST