Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1029 ATGGATGTTGCACATTTTTTGTTTGGAATCTTTGGGAATGCTTCCGCTCTGTTCCTCTTCTTGGCTCCAGTGATCACATTCAAGAGGATTATAAAGAACAGATCCACAGAGAAGTTCTCGGGCATTCCATATGTCATGACACTGCTCAATTGTCTCCTTTCAGCTTGGTATGGTTTGCCTTTTGTGTCTCCCCACAACATATTAGTGTCAACAGTGAATGGCACTGGATCATTCATTGAAATCATATACGTGTTAATCTTCATCGTATTGGCACCAAGGAAGGAGAAGGCTAAAATTCTTGGTCTCTTCACCTTCGTGCTCTCGGTGTTCTCTGCAGTTGTTTTCGTGTCCCTTTTTGCTCTTCATGGCAATTCCAGAAAGCTCTTCTGTGGCTTCGCTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGGTACCTAATGGTGTTGGTTCTGCTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGAGACAATAAAGGTGTTCCAAGGAAGCAAGCCCCAACAGAGGAGGAGTCCATGGAGATGGGGGATGCAAAGCCCCAACAAGGGAAGCAATCCAATGCCAATGGAATTCAAGGATGA 624 0.4375 MDVAHFLFGIFGNASALFLFLAPVITFKRIIKNRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGTGSFIEIIYVLIFIVLAPRKEKAKILGLFTFVLSVFSAVVFVSLFALHGNSRKLFCGFAAAIFSIIMYGSPLSIMVPNGVGSALGTMQLILYFIYRDNKGVPRKQAPTEEESMEMGDAKPQQGKQSNANGIQG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1029 207 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 149 IPR018180 GO:0051119
Gso6g1029 207 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 148 204 IPR018180 GO:0051119
Gso6g1029 207 MobiDBLite consensus disorder prediction 177 191 - -
Gso6g1029 207 MobiDBLite consensus disorder prediction 177 207 - -
Gso6g1029 207 PANTHER RAG1-ACTIVATING PROTEIN 1 4 149 - -
Gso6g1029 207 PANTHER RAG1-ACTIVATING PROTEIN 1 148 204 - -
Gso6g1029 207 Gene3D - 99 179 - -
Gso6g1029 207 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Gso6g1029 207 MobiDBLite consensus disorder prediction 193 207 - -
Gso6g1029 207 Gene3D - 9 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1029 Gso-Chr6 10042901 10047668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1029 1 149 Miscellaneous Gene Families AT1G21460 74.497 5.22e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1029 K15382 - gmx:100800304 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2021 4 50560814 50564250 Gso6g1029 6 10042901 10047668 GST