Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2021 ATGGATGTTGCACATTTTTTGTTTGGCATCTTTGGGAATGCTTCCGCTCTGTTCCTATTCTTGGCTCCAGTGATCACATTCAAGAGGATTATTAAGAACAGATCCACAGAGAAGTTCTCGGGCATTCCATATGTCATGACACTGCTCAATTGTCTCCTTTCAGCTTGGTATGGTTTGCCTTTTGTGTCTCCCCACAACATATTAGTGTCAACAGTGAATGGCACTGGATCATTGATAGAAATCATATACGTGTTGATCTTCATCGTATTGGCACCAAGGAAGGAAAAGGCTAAAATTCTTGGTCTCTTCACCTTCGTGCTCTCGGTGTTCTCTGCTGTTGTTTTCGTGTCACTCTTTGCCCTTCATGGCAATTCCAGAAAGCTCTTCTGTGGCTTCGCTGCAGCCATATTTTCCATTATCATGTATGGCTCGCCACTCTCAATTATGAGACTAGTGATCAAAACCAAGAGTGTGGAGTTCATGCCCTTCTTCTTGTCTCTGTTTGTTTTTCTCTGCGGCACTTCCTGGTTTATCTTTGGTCTGCTAGGCCGTGACCCATTTGTTGCAGTACCTAATGGTGTTGGTTCTGCTTTGGGGACAACGCAACTAATATTATATTTCATATACCGAGACAATAAAGGCGTTACAGGGAAACAAGCCCCAACAGAGGAGGAATCCATGGAGATCGGGGATGTAAAGCCCCAACAAGGGAAGCAATCCAATGCAAATGGAATTCAAGGATGA 744 0.4382 MDVAHFLFGIFGNASALFLFLAPVITFKRIIKNRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGTGSLIEIIYVLIFIVLAPRKEKAKILGLFTFVLSVFSAVVFVSLFALHGNSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGTTQLILYFIYRDNKGVTGKQAPTEEESMEIGDVKPQQGKQSNANGIQG* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2021 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 244 - -
Gso4g2021 247 MobiDBLite consensus disorder prediction 218 247 - -
Gso4g2021 247 Gene3D - 126 220 - -
Gso4g2021 247 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Gso4g2021 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Gso4g2021 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 244 IPR018180 GO:0051119
Gso4g2021 247 Gene3D - 9 104 - -
Gso4g2021 247 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2021 Gso-Chr4 50560814 50564250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2021 1 190 Miscellaneous Gene Families AT1G21460 77.895 1.64e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2021 K15382 - gmx:100785977 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2021 4 50560814 50564250 Gso4g2021 4 50560814 50564250 ECH
Gso4g2021 4 50560814 50564250 Gso6g1029 6 10042901 10047668 GST