Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1014 ATGATGGAAGTGACGAAAGACCCTAATTCAGATTTCGAACTCGAACTCTACACCATCCCAAGCTCTTCAAGATGGTTCGCGTGGGAAGAAATCCACGAAACGGAGAGAACAGCGTTCAAGGAATACTTCGACGGAAACTCAATAACGCGAACCCCTAAGATATACAAAGAGTACCGAGACTTCATCATCAACAAGTACAGGGAAGAGCCCTCGAGGAGGCTCACCTTCACCGAGGTGCGCAAGTCGCTGGTCGGCGACGTCACGTTCCTGCACAAGGCCTTCCTCCTCTTGGAGCATTGGGGTCTGATCAACTACGGCACCGCGCAACCTTCTTCCGGTGCGGACGCAGCGGAGGAGGAGGAGGAGCATCGCAAGGTTCGTCTCGAGGAAGGCGCCCCTGGTGGGATTCGTGTCGCGGCGACGCCGAATTCGTTGAAGCCTATGTTGTTGCCTCGCAATGGGAAGAGTGGGGTGAATGCGAGTGGGGCTTCTCTCAAATTGCCGCCGCTGGCGTCGTACTCTGATGTTTATGGTGATTTGATTAGGCAGAAAGAGGGCAACTGTGGCCTTTGCGGTCACAAATGTGGTTCTGGACATTACCGATGTACACAGGATAATTTCATTATTTGTATTAATTGTTTCAAAAGCGGGAATTACGGGGAGAAAAGGTCCACGGAGGATTTTGTATTGAGTGAGTCAAGTGAAAATAGTGGTAAGCATGACACTGTCTGGACTGAGGCAGAAACTCTTCTCCTTCTAGAATCTGTTTTGAAGCATGGCGATGATTGGGAACTTGTTGCTCAAAGTGTTCAAACCAAGACCAAACTTGATTGTATCTCGAAACTCATTGAGCTGCCCTTTGGGGAGCTCATGTTGGGCCCTGCTCACAGAAATGTTAACATTAACGATGCTAATGGCATCGTGAACAATGCAAAACAAGTTCAATCATCTTCATCTGATAACCAAGAGATTTCAAAGACAAAGGACCAATCTCCTGAGTTTACAAATGAAAATGAGCAGAACGGAGATGCTGTGAAGGAAAGTCCTTCAAAAAGACAGCGTGTTGCTTCCCTTTCAGATTCCAGCAGTTCGCTAATGAATCAGGTGGGACTGATCTCTAATGTGGTTGACCCTCATATCACAGCTGCTGCAGCTGATGCGGCTGTTTCAGCTCTTTGTGATGAGGATTTGTGTCCAAGGGAGATATTTGATGTTGACGGTGAAGAAGGTTTAGAGATGGAGAGGTCCTCTCTATCAGAAATACCTTTGACACTGCGTGTAAGAGCTGCCACTGCAACTGCTCTTGGAGCTGCTGCTGCACGAGCAAAGTTGTTGGCAGACCAGGAAGACAGAGAGATTGAACATTTAGTAGCAACTATAATTGAAGCACAGATTGACAAAATGCTACAGAAGGTTAAACATTTTGACGATCTGGAGCTATTGATGGAAAAGGAACACGCTGAAATGGAAAATAAAAAAGATTCTATCTTGACTGAACGGATTGATGTGTTACGGAGAACATTTAGATCTGGAGTCACTAGATGGAAAGATTATTCTTATGTAAAATCTTAG 1572 0.4618 MMEVTKDPNSDFELELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFLLLEHWGLINYGTAQPSSGADAAEEEEEHRKVRLEEGAPGGIRVAATPNSLKPMLLPRNGKSGVNASGASLKLPPLASYSDVYGDLIRQKEGNCGLCGHKCGSGHYRCTQDNFIICINCFKSGNYGEKRSTEDFVLSESSENSGKHDTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHRNVNINDANGIVNNAKQVQSSSSDNQEISKTKDQSPEFTNENEQNGDAVKESPSKRQRVASLSDSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVDGEEGLEMERSSLSEIPLTLRVRAATATALGAAAARAKLLADQEDREIEHLVATIIEAQIDKMLQKVKHFDDLELLMEKEHAEMENKKDSILTERIDVLRRTFRSGVTRWKDYSYVKS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1014 523 CDD SANT 244 281 IPR001005 -
Gso6g1014 523 Pfam SWIRM domain 20 105 IPR007526 GO:0005515
Gso6g1014 523 SMART sant 240 288 IPR001005 -
Gso6g1014 523 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 15 514 - -
Gso6g1014 523 PANTHER SWI/SNF COMPLEX-RELATED 15 514 - -
Gso6g1014 523 Pfam Myb-like DNA-binding domain 244 282 IPR001005 -
Gso6g1014 523 ProSiteProfiles SANT domain profile. 239 290 IPR017884 -
Gso6g1014 523 SUPERFAMILY Homeodomain-like 16 110 IPR009057 -
Gso6g1014 523 MobiDBLite consensus disorder prediction 313 359 - -
Gso6g1014 523 ProSiteProfiles SWIRM domain profile. 17 114 IPR007526 GO:0005515
Gso6g1014 523 Gene3D - 23 109 IPR036388 -
Gso6g1014 523 Pfam SWIRM-associated region 1 433 507 IPR032451 -
Gso6g1014 523 Gene3D - 240 288 - -
Gso6g1014 523 ProSiteProfiles Myb-like domain profile. 236 278 IPR001005 -
Gso6g1014 523 SUPERFAMILY Homeodomain-like 239 294 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1014 Gso-Chr6 9851391 9855606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1014 K11649 - gmx:100800135 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2034 4 50736569 50740832 Gso6g1014 6 9851391 9855606 GST