Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2034 ATGGAAGTAGCGAAAGACCCTAACTCACAGGCGGATTCAGATTCGGAACTGGAACTCTATACCATCCCAAGCTCTTCAAGATGGTTCGCGTGGGAAGAAATTCACGAAACGGAGAGAGCAGCATTCAAGGAATACTTCGACGGAAGCTCGATATCGCGAAGCCCGAAGATATACAAAGAGTACCGAGACTTCATCATCAACAAGTACAGAGAAGAGCCCTCCAGAAGGCTCACATTCAGCGAGGTTCGAAAGTCGCTCGTGGGAGACGTGACGTTTCTTCACAAGGTCTTCCTCTTCTTGGAGCATTGGGCCTTGATCAACTACGGCACCGCAGAGGATGTGGAGGAGGACCATTGCAAGGTTCGCTTCGAAGAAGGCGCCCCCAGTGGGATTCGAGTCGCCGCCACGCCCAATTCCTTGAAGCCTATGCTGCTGCCTCGCAATGGGAAGAGTGCCGCCAATGCCACTGGGGCTTCTCTCAAATTGCCGCCTCTGGCCTCTTACTCTGATGTTTATGGTGATTTGATTAGGCAGAAAGAGGGCAACTGTGGCCTCTGCGCTCACCAATGTGGTTCTGGACATTACCGATGTACACAGGATAATTTTATTATTTGTGCAAATTGTTTCAAAAGTGGGAATTATGGGGAGAAAAGGTCCGCAGAGGATTTTGTATTTAGTGAGTCAAGTGAAAATAGTGTCAAACATGACACTGTCTGGACTGAGGCTGAAACTCTTCTCCTTTTAGAATCTGTTTTGAAGCATGGGGATGATTGGGAGCTTGTTGCTCAAAGTGTTCAAACCAAGACCAAACTTGATTGTATCTCGAAACTCATTGAGCTGCCCTTTGGGGAGCTCATGTTGGGCCCTACTCACAAAAATGTTAACATTAACGGTGCTAATGGCATCATGAACAATGCCAAACAAGTTCAATCATCTTCATCTGACAACCAAGAAATTTCAAAGACAAAGGACCAGACTCCTGAGCTTACAAATGAAAATGAGCAGAACGGAGATGCAGTGAAGGAAAGTCCTTCAAAAAGACAGCGTGTTGCTGCCCTTTCAGATTCCAGCAGTTTGCTAATGAATCAGGTGGGACTGATCTCTAATGTGGTTGACCCTCATATCACAGCTGCTGCAGCTGATGCAGCTGTTTCAGCTCTTTGTGATGAGGATTTGTGTCCAAGGGAGATATTTGATGTTGAAGAGGATTATTCAGCAAGAGCTCTTGAGGGTGAAGAAGGTTTAGAGATGGAGAGGTCCTCTCTATCAGAAATACCTTTGACACTGCGTGTAAGAGCTGCCACTGCAACTGCTCTTGGAGCTGCTGCTGCACGAGCAAAATTGTTGGCAGATCAGGAAGACAGAGAGATTGAACATTTAGTAGCAACTATAATTGAAGCACAGATTGAGAAAATGCTACGCAAGGTTAAACATTTTGACAATCTGGAGCTGTTGATGGAAAAGGAACACGCTGAAATGGAAAATCTAAAAGATTCTATCTTGACTGAACGGATTGATGTGTTGCGGAGAACATTTAGATCTGGAGTCACTAGATGGAAGGATTATTCTTATGCAAAATCTTAG 1584 0.4539 MEVAKDPNSQADSDSELELYTIPSSSRWFAWEEIHETERAAFKEYFDGSSISRSPKIYKEYRDFIINKYREEPSRRLTFSEVRKSLVGDVTFLHKVFLFLEHWALINYGTAEDVEEDHCKVRFEEGAPSGIRVAATPNSLKPMLLPRNGKSAANATGASLKLPPLASYSDVYGDLIRQKEGNCGLCAHQCGSGHYRCTQDNFIICANCFKSGNYGEKRSAEDFVFSESSENSVKHDTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPTHKNVNINGANGIMNNAKQVQSSSSDNQEISKTKDQTPELTNENEQNGDAVKESPSKRQRVAALSDSSSLLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVEEDYSARALEGEEGLEMERSSLSEIPLTLRVRAATATALGAAAARAKLLADQEDREIEHLVATIIEAQIEKMLRKVKHFDNLELLMEKEHAEMENLKDSILTERIDVLRRTFRSGVTRWKDYSYAKS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2034 527 Pfam Myb-like DNA-binding domain 239 277 IPR001005 -
Gso4g2034 527 ProSiteProfiles SANT domain profile. 234 285 IPR017884 -
Gso4g2034 527 Gene3D - 235 283 - -
Gso4g2034 527 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 16 518 - -
Gso4g2034 527 Pfam SWIRM-associated region 1 437 511 IPR032451 -
Gso4g2034 527 Gene3D - 26 112 IPR036388 -
Gso4g2034 527 MobiDBLite consensus disorder prediction 307 348 - -
Gso4g2034 527 PANTHER SWI/SNF COMPLEX-RELATED 16 518 - -
Gso4g2034 527 ProSiteProfiles Myb-like domain profile. 239 273 IPR001005 -
Gso4g2034 527 Pfam SWIRM domain 23 108 IPR007526 GO:0005515
Gso4g2034 527 SMART sant 235 283 IPR001005 -
Gso4g2034 527 SUPERFAMILY Homeodomain-like 234 289 IPR009057 -
Gso4g2034 527 CDD SANT 239 276 IPR001005 -
Gso4g2034 527 ProSiteProfiles SWIRM domain profile. 20 117 IPR007526 GO:0005515
Gso4g2034 527 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Gso4g2034 527 Coils Coil 479 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2034 Gso-Chr4 50736569 50740832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2034 K11649 - gmx:100790238 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2034 4 50736569 50740832 Gso6g1014 6 9851391 9855606 GST