Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0994 ATGGCAGTTCCAGTGATTGATTTTTCAAAGCTGAATGGTGAAGAAAGAGCCAAAACTATGGCACAGATTGCTAATGGGTGTGAAGAGTGGGGATTTTTTCAGTTGATCAACCATGGTATTCCAGAGGAACTCCTTGAGAGGGTGAAGAAGGTTGCCTCTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAGAACTCCACATCAGTGAAGCTACTAAGCGATTCAGTTGAAAAGAAGAGCAGCGAAATGGAGCATGTGGATTGGGAGGATGTTATCACTCTCCTTGATGATAATGAATGGCCAGAAAAAACACCAGGATTCAGGGAAACCATGGCAGAATATCGAGCCGAGTTAAAGAAATTGGCAGAGAAACTGATGGAGGTGATGGATGAGAATCTTGGCTTAACAAAAGGATACATCAAGAAGGCACTGAATGATGGAGATGGAGAAAATGCCTTCTTTGGCACCAAGGTGAGCCACTACCCTCCATGTCCCCATCCAGAGCTCGTGAAGGGTCTGCGAGCTCACACCGATGCAGGAGGCGTAATCCTACTCTTCCAAGATGACAAGGTTGGTGGCCTTCAGATGCTGAAAGATGGGCAATGGATTGATGTGCAGCCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAGGTCTTGAGCAATGGTAGATACAAGAGTTGCTGGCACAGGGTTCTGGCCACACCAGATGGGAACAGAAGATCAATTGCCTCCTTCTATAATCCTTCATTCAAGGCCACCATATGTCCTGCACCACAACTTGTGGAGAAAGAAGACCAACAAGTAGATAAAACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTTCCCAAGGAACCAAGATTCCAAGCTGTTAGGGCCATGTGA 924 0.4524 MAVPVIDFSKLNGEERAKTMAQIANGCEEWGFFQLINHGIPEELLERVKKVASEFYKLEREENFKNSTSVKLLSDSVEKKSSEMEHVDWEDVITLLDDNEWPEKTPGFRETMAEYRAELKKLAEKLMEVMDENLGLTKGYIKKALNDGDGENAFFGTKVSHYPPCPHPELVKGLRAHTDAGGVILLFQDDKVGGLQMLKDGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLATPDGNRRSIASFYNPSFKATICPAPQLVEKEDQQVDKTYPKFVFGDYMSVYAEQKFLPKEPRFQAVRAM* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0994 307 Pfam 2OG-Fe(II) oxygenase superfamily 160 253 IPR044861 -
Gso6g0994 307 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 305 - -
Gso6g0994 307 Coils Coil 112 132 - -
Gso6g0994 307 Gene3D - 2 307 IPR027443 -
Gso6g0994 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 153 253 IPR005123 -
Gso6g0994 307 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 305 - -
Gso6g0994 307 SUPERFAMILY Clavaminate synthase-like 2 300 - -
Gso6g0994 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 99 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0994 Gso-Chr6 9603206 9605155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0994 1 270 Glycosyltransferase AT5G59530 33.922 7.02e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0994 K05933 - gmx:100790622 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2055 4 50989509 50991412 Gso6g0994 6 9603206 9605155 GST