Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2055 ATGGCAGTTCCAGTGATTGATTTTTCAAAGCTCAATGGTGAAGAAAGAGCCAAAACTATGGCACAGATTGCTAATGGATGTGAAGAGTGGGGATTTTTTCAGTTGATCAACCATGGCATTCCTGAGGAACTCCTTGAGAGGGTGAAGAAGGTTGCTTCTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAGAACTCCAAATCAGTGAAGCTACTAAGCGATTTAGTCGAAAAGAAGAGCAGCGAAAAGCTGGAGCATGCGGATTGGGAGGATGTTATCACTCTCCTTGATGATAACGAATGGCCAGAAAAAACACCAGGCTTCAGGGAAACCATGGCGAAATATCGGGCCGAGCTAAAGAAATTGGCAGAGAAAGTGATGGAGGTGATGGATGAGAATCTTGGCTTAACCAAAGGGTACATCAAGAAGGCACTGAATGGTGGAGATGGAGACAATGCCTTCTTTGGCACCAAGGTGAGCCACTACCCTCCATGTCCCCATCCAGGGCTTGTGAAGGGTCTGCGAGCTCACACCGACGCAGGAGGCGTCATCCTACTCCTCCAAGATGACAAGGTTGGTGGCCTTCAGATGCTGAAAGATGGGCAATGGATTGATGTGCAGCCTTTGCCAAATGCCATTGTCATCAACACTGGTGACCAGATTGAGGTCCTGAGCAATGGTAGATACAAGAGTTGCTGGCACAGGGTTCTGGCCACACCAGATGGGAACAGAAGATCAATTGCCTCCTTCTATAACCCTTCATTCAAAGCCACCATATGTCCTGCACCACAACTTGTGGAGAAAGAAGACCAACAAGTGAATCAAACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTTCCCAAGGAACCAAGGTTCCAAGCTGTTAGGGCCATGTGA 927 0.4682 MAVPVIDFSKLNGEERAKTMAQIANGCEEWGFFQLINHGIPEELLERVKKVASEFYKLEREENFKNSKSVKLLSDLVEKKSSEKLEHADWEDVITLLDDNEWPEKTPGFRETMAKYRAELKKLAEKVMEVMDENLGLTKGYIKKALNGGDGDNAFFGTKVSHYPPCPHPGLVKGLRAHTDAGGVILLLQDDKVGGLQMLKDGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLATPDGNRRSIASFYNPSFKATICPAPQLVEKEDQQVNQTYPKFVFGDYMSVYAEQKFLPKEPRFQAVRAM* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2055 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 306 - -
Gso4g2055 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
Gso4g2055 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 306 - -
Gso4g2055 308 SUPERFAMILY Clavaminate synthase-like 2 301 - -
Gso4g2055 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 100 IPR026992 -
Gso4g2055 308 Gene3D - 2 308 IPR027443 -
Gso4g2055 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Gso4g2055 308 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2055 Gso-Chr4 50989509 50991412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2055 1 271 Glycosyltransferase AT5G59530 33.216 1.09e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2055 K05933 - gmx:100796909 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2055 4 50989509 50991412 Gso4g2055 4 50989509 50991412 ECH
Gso4g2055 4 50989509 50991412 Gso6g0994 6 9603206 9605155 GST