Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0939 ATGGAACATCAGAAGAGCGGGAGCAAGCTAACCAGAAACCACTCCTCGCTTCTCCGATCCTCCGTTCACAACCTCTCTTCCATCATCACCCAACACGAACACGAACAACAACTCCTCCTCGATGTTCACGACGATGACGACAAGAACAAGAAGCCCAAGAAACCCCACGTCCAGGCTCAGGCCCAAGCCCACCATGCCCAGGCCCTGGCCCACAGGTCTTCCGCCTATTCCGCCCTGGCGGTCTTCTTCCTCGGCGCGTGCTCGCTCCTGTTCTACTTCTTCTACCTGGAGGTGTCCTCCTCGGAGAATTTCCTGCTGGCGCTGATCTTCGTGGCCGTGGCGCTCTACTTCGTCTCCAAAAACAAGGGCCTCATCCACAGATCGTTCTCTCTGGCGAAGCATTCGTGGGAGGAGAATGTGAAGCGCCTAGGGTTTTCCAAGGCGGCAGCGGTGGCGAGGCCGGTGCAGTGGTTCATCGGAGACCCCGCCGCAGCAACAACAACCAGGAAGAAGGCGGCGGCGAAGATAGTGAGGGAAGGGGTGGAGTTTTACAGCAATGGGGATTTCTACGAAGGGGAGTTTCACAAGGGAAGAAGCAACGGGAGTGGGGTCTACCATTACTTCGTGAATGGGAGGTACGAAGGGGATTGGGTGGATGGAAGGTACGATGGGTACGGAATTGAAAGCTGGGCGAGAGGGAGTCGCTATAGGGGACAATATAGGCAAGGGTTGAGGCACGGTTATGGGGTTTATAGGTTCTACACTGGGGATTCTTATTCAGGAGAGTGGTGTAACGGTCAGAGCCATGGCGTGGGTCTTCAAACTTGCTCCGATGCTAGCTGTTATATTGGTCAATTTAAGTATGGCGTCAAACACGGTCTTGGCTGTTACCATTTTAGAAATGGGGATAGATATGCTGGAGAGTATTTTGGGGACAAGATACATGGATTTGGGGTCTACCACTTTACCAATGGCCACTATTATGAGGGAGCATGGCACGAGGGTCGTAGGCAAGGTATTGGCTCATACACTTTTCGAAATGGTGACAGAAGATGTGGTGAATGGGATGCTGGCACCCTCAAGCAATCTCTACCACCACTATCTGATGTTGTTCTTCGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAGAATGCTATAAACCTTAAACGAGTAGATGACCAGGTTAACAAAGCAGTAATCGCTGCGAGCAAGGCTGCCACTGCTGCTAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGTGACACTGATGTCTAA 1293 0.5197 MEHQKSGSKLTRNHSSLLRSSVHNLSSIITQHEHEQQLLLDVHDDDDKNKKPKKPHVQAQAQAHHAQALAHRSSAYSALAVFFLGACSLLFYFFYLEVSSSENFLLALIFVAVALYFVSKNKGLIHRSFSLAKHSWEENVKRLGFSKAAAVARPVQWFIGDPAAATTTRKKAAAKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYHYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYSGEWCNGQSHGVGLQTCSDASCYIGQFKYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFTNGHYYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGTLKQSLPPLSDVVLRAVQAARKTAENAINLKRVDDQVNKAVIAASKAATAARVAAVKAVQNRMDGKFCDTDV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0939 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 184 289 - -
Gso6g0939 430 Pfam MORN repeat 305 326 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 213 235 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 190 207 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 236 257 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 259 278 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 328 350 IPR003409 -
Gso6g0939 430 Pfam MORN repeat 282 304 IPR003409 -
Gso6g0939 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 255 358 - -
Gso6g0939 430 SMART morn 211 232 IPR003409 -
Gso6g0939 430 SMART morn 188 209 IPR003409 -
Gso6g0939 430 SMART morn 257 278 IPR003409 -
Gso6g0939 430 SMART morn 280 301 IPR003409 -
Gso6g0939 430 SMART morn 303 324 IPR003409 -
Gso6g0939 430 SMART morn 326 347 IPR003409 -
Gso6g0939 430 SMART morn 234 255 IPR003409 -
Gso6g0939 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 13 424 - -
Gso6g0939 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 13 424 - -
Gso6g0939 430 Gene3D - 177 219 - -
Gso6g0939 430 Gene3D - 220 264 - -
Gso6g0939 430 Gene3D - 265 310 - -
Gso6g0939 430 Gene3D - 311 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0939 Gso-Chr6 9037541 9039833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0939 167 364 Acyl Lipid Metabolism Gene Families AT1G21980 33.838 1.91e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0939 - - gmx:100818442 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2102 4 51494260 51496505 Gso6g0939 6 9037541 9039833 GST