Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2102 ATGGAGCATCAGAAGAGCGGGAGCAAGCTAACCAGAACCCACTCCTCCCTTCTCCGTTCCTCCGTTCACAGCCTCTCTTCCATCATCACCCAGCACGAACACGAACACGAACACGAACAACAACTCCTCCTCGATGTTGACGACCACGATGACAAGAATAAGAAGCCCAAGAAACCCCACGTTCAGGCCCAAGCCCAATCCCAGGCCCAGGCCCAGGCCCATAGGTCATCCGCATATTCCGCCATGGCGGTCTTCTTCCTCGGCGCCTGCTCGCTTTTGTTCTACTTCTTCTACCTGGAGGTGTCCTTCTCGGAGAATTTCCTACTGGCGCTGATTTTCGTGGCCGTGGCGCTCTACTTCGTCTCCAAAAACAAGGGCCTCATCCTCAGATCGTTCTCTCTGGCGAAGCTTTCGTGGGAGGAGAATGTGAAGCGGCTGGGGTTTTCCAAGGCGGCGGCGGCGGCGAGGCCGGTGCAGTGGTTCATAGGAGAGCCCGCCGCAACAACAACGAGGAAGAAGGCGGCGGCGGCGGCGAAGATAGTGAGGGAAGGTGTGGAGTTTTACAGCAATGGTGATTTCTACGAGGGGGAGTTTCACAAAGGAAGAAGCAACGGGAGTGGGGTCTACCATTACTTGGTGAATGGGAGGTACGAAGGGGATTGGGTTGATGGAAGGTACGATGGATACGGAATTGAGAGCTGGGCGAGAGGGAGTCGTTATAGGGGTCAGTATAGGCAAGGGTTGAGGCATGGTTATGGGGTTTATAGGTTCTACACTGGGGACTCTTATTCTGGAGAGTGGTGTAACGGTCAGAGCCATGGTGTGGGTCTTCAAACTTGCTCCGATGCTAGCTGTTATATTGGTCAGTTTAAGTATGGCGTCAAGCACGGTGTTGGCTGTTACCATTTTAGAAATGGGGATAGATATGCTGGAGAGTATTTTGGGGACAAGATACATGGATTTGGGGTCTACCACTTTGCCAACGGCCACTGTTATGAGGGAGCATGGCACGAGGGTAGTAGGCAAGGTATTGGCTCGTACACTTTTCGAAATGGTGACAGAAGAAGTGGTGGATGGGATGCTGGCAACCTCAAGCAATCTCTACCACCACTATCTGATGTTGTTCTTCGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAGAATGCTATAAACCTTAAACGAGTGGATGACCAGGTTAACAAAGCAGTAATAGCTGCGAGCAAGGCTGCCACTGCTGCTAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGCGACACTGATGTCTAA 1305 0.5195 MEHQKSGSKLTRTHSSLLRSSVHSLSSIITQHEHEHEHEQQLLLDVDDHDDKNKKPKKPHVQAQAQSQAQAQAHRSSAYSAMAVFFLGACSLLFYFFYLEVSFSENFLLALIFVAVALYFVSKNKGLILRSFSLAKLSWEENVKRLGFSKAAAAARPVQWFIGEPAATTTRKKAAAAAKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYHYLVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYSGEWCNGQSHGVGLQTCSDASCYIGQFKYGVKHGVGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGSRQGIGSYTFRNGDRRSGGWDAGNLKQSLPPLSDVVLRAVQAARKTAENAINLKRVDDQVNKAVIAASKAATAARVAAVKAVQNRMDGKFCDTDV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2102 434 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 260 362 - -
Gso4g2102 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 13 428 - -
Gso4g2102 434 MobiDBLite consensus disorder prediction 49 68 - -
Gso4g2102 434 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 188 293 - -
Gso4g2102 434 SMART morn 238 259 IPR003409 -
Gso4g2102 434 SMART morn 330 351 IPR003409 -
Gso4g2102 434 SMART morn 261 282 IPR003409 -
Gso4g2102 434 SMART morn 284 305 IPR003409 -
Gso4g2102 434 SMART morn 192 213 IPR003409 -
Gso4g2102 434 SMART morn 215 236 IPR003409 -
Gso4g2102 434 SMART morn 307 328 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 286 308 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 194 211 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 240 261 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 332 354 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 309 330 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 217 239 IPR003409 -
Gso4g2102 434 Pfam MORN repeat 263 282 IPR003409 -
Gso4g2102 434 Gene3D - 315 375 - -
Gso4g2102 434 Gene3D - 181 223 - -
Gso4g2102 434 Gene3D - 269 314 - -
Gso4g2102 434 Gene3D - 224 268 - -
Gso4g2102 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 13 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2102 Gso-Chr4 51494260 51496505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2102 169 368 Acyl Lipid Metabolism Gene Families AT1G21980 34.000 7.92e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2102 - - gmx:100814152 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2102 4 51494260 51496505 Gso4g2102 4 51494260 51496505 ECH
Gso4g2102 4 51494260 51496505 Gso6g0939 6 9037541 9039833 GST