Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0889 ATGAGTGTGGATTTGAACAAAACTGCCTCCAACAGTCATGATAAAATGGCAATATCAGCAGAACAGCAGGCAAAGATCATTGAGGTGAGAGGGTTGATAGGGCCACTATCTGATAAGGAATCTGTGTACTGTTCTGATGCTTCCATCTCAAGGTATTTAAGGGCACGAAATTGGAATGTCAAGAAGGCAGCTCAAATGTTGAAGCAAAGCCTAAAATGGAGAAAAGAATACAAGCCTCAAGAGATCCGCTGGGAAGAGGTTGCTGCTGTAGCAGAGAAAGGGATGTTGTATAGACCAAATTATTCTGACAAGTATGGGAGACCAGTGATTGTAATGAGACCTTGTAACAAGAAATCAACACCAGCACAGGACATGATTAAGTATTTTGTATACTGCATGGAGAATGCCATTATAAATCTGCCACCACACGAGGAACAGTTGGCCTGGCTGATAGATTTCCAGGGTGTCAAGATGTCAGATGTGTCATTCAAGACGTCACGTGAAACTGTCCATATATTACAAGAATATTATCCAAAGCATCTGGGTTTGGCAATGCTGTACAAAGCACCTAGGATCTTCCAACCATTCTTCTCGATGCTAAGGCCATTTCTAGAGACAGAGCTTTACAATAAAGTAAAGTTTGGGTATTCGGACGACCACAACACAAAGAAGATATTGGAGGATTTGTTTGATATGGATAAACTTGAATCTGCATTTGGTGGGAATGATGATACAGGATTTGACATGAATAAATATGCAGAAAGAATGAAAGAGGATGAAAATAAGATTCTTTCTTTCTGGACACAGGCCAAGTCTGTGTCTTAA 825 0.4036 MSVDLNKTASNSHDKMAISAEQQAKIIEVRGLIGPLSDKESVYCSDASISRYLRARNWNVKKAAQMLKQSLKWRKEYKPQEIRWEEVAAVAEKGMLYRPNYSDKYGRPVIVMRPCNKKSTPAQDMIKYFVYCMENAIINLPPHEEQLAWLIDFQGVKMSDVSFKTSRETVHILQEYYPKHLGLAMLYKAPRIFQPFFSMLRPFLETELYNKVKFGYSDDHNTKKILEDLFDMDKLESAFGGNDDTGFDMNKYAERMKEDENKILSFWTQAKSVS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0889 274 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 83 247 IPR001251 -
Gso6g0889 274 SUPERFAMILY CRAL/TRIO domain 84 260 IPR036865 -
Gso6g0889 274 Pfam CRAL/TRIO domain 94 241 IPR001251 -
Gso6g0889 274 Pfam CRAL/TRIO, N-terminal domain 25 68 IPR011074 -
Gso6g0889 274 Gene3D - 3 272 IPR036865 -
Gso6g0889 274 PANTHER GH16843P 1 274 - -
Gso6g0889 274 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 274 - -
Gso6g0889 274 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Gso6g0889 274 CDD SEC14 90 242 IPR001251 -
Gso6g0889 274 SMART sec14_4 90 244 IPR001251 -
Gso6g0889 274 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0889 Gso-Chr6 8490130 8492333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0889 - - gmx:100802091 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0904 4 9903158 9907609 Gso6g0889 6 8490130 8492333 GST