Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0884 ATGGAGGAGCGGGTGTCTTCGTCATCGCTACCGTCGCCATCACCCCCACCTCTTGAAAAGAACCATAATACCGACAAACTCAAGTTACCAGACTTAGACCCTGGCACCTACGTTGTCCAGGTCCCCAAGGACCAAGTCTACCGTGTTCCGCCGCCGGAAAACGCCCAAATCGCCGAGAGCCATAAGAAATCTCCTCCCAACAAGGAAGCAAAAACGTCACGCTGCTGCTTGTGTTGCGTGTTGTTCTTCATTATATTCTTGGTCCTTGCAATTCTTCTCGGAGCCGTTCTAGGTGGTCTTTTTTCCATGTTACTCACACCAGAGGACCCTAAGTTTTCCATCACAAGCTTTAAGGTCGTGGAGACCAAGCCACACCCCAAATATGACGTCACTTTGGAAGTCCACAATCCAAATTCCGACGTGGGAATTTTGTATAATGGCAAAGGCCATGTCTCCCTCTCTCTAAGGCGACAAGAGAATATTGCTTCAGGAGCATACCCTACTTTCCGTCAAGACTCTCACGATACGACAACGTTTGGGCTAACTTTAACATCATCCTCAAAAGCCGTTCTCCCTAAGGAGGTGGAGGAAAGCGTCAGGAACGATAAGAAGAAAGTGAGTGTGACATTCTCGTTGGCCATTCACGCCCTAGCACACATGAAAATGGGCTTGTTGCGTAGTGGGACAATGAAATTCGATGTTACGTGCAAAGTGAAGTTGGATACGTTGGCCAAAACCACTCACGTACTCTCTCAACAATGCGAAACTAAACGACACTAG 780 0.4808 MEERVSSSSLPSPSPPPLEKNHNTDKLKLPDLDPGTYVVQVPKDQVYRVPPPENAQIAESHKKSPPNKEAKTSRCCLCCVLFFIIFLVLAILLGAVLGGLFSMLLTPEDPKFSITSFKVVETKPHPKYDVTLEVHNPNSDVGILYNGKGHVSLSLRRQENIASGAYPTFRQDSHDTTTFGLTLTSSSKAVLPKEVEESVRNDKKKVSVTFSLAIHALAHMKMGLLRSGTMKFDVTCKVKLDTLAKTTHVLSQQCETKRH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0884 259 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 23 257 - -
Gso6g0884 259 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g0884 259 Pfam Late embryogenesis abundant protein 131 236 IPR004864 -
Gso6g0884 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0884 Gso-Chr6 8436763 8438140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0884 34 256 EF-hand Containing Proteins AT5G21130 32.328 3.72e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0884 - - gmx:100816505 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0896 4 9719588 9720654 Gso6g0884 6 8436763 8438140 GST