Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0896 ATGGAGGAGCGGGTGTTGTTGCCATCACCGCCACCGCCACCGCCACCTCTCGAAAAGAAACATAGTACTAACAAACTCGAGTTACCAGACTTCAACCCTGGCACCTACGTTGTCCAGGTCCCCAAGGACCAAGTCTACCGTGTTCCGCCGCCGGAAAACGCCCGAATCGCCGAGAGCCATAAGAAAGCCCCTCCCAAGGCGGCGAAAACGTCACGCTGCTGCTTGTTTTGCGTATTGTTCTTCATTATATTCTTCGTCCTTCTCATTCTTCTAGGAGCCGTTCTAGGTGGTCTTTTTTCCATGTTACTCACACCAAAGGACCCTCAGTTTTCCATCACACGCTTTAAGGTGGTGGAGACCAAACCCCACCCCAAATACGACGTCACTTTGGAAGTTCACAATCTAAATTCCGACGTGGGAGTTTCGTATAAAAACAAAGGCCATGTCTCCCTCTCTCTTAGGCGACAAGAGGTTGCTTCAGGAGCGTACCCTAGTTTCAATCAAGACGCTCACGATAGGACAACGTTTGGCGTAACTTTAACATCCTCAAAAGTCGGTCTCCCAAAGGAGGTGGAGGAAAGCGTCACGAACGATAAGAAGAAAGTGAATGTGACATTCTCTTTGGCCATTCACGCCCTAGCACGCATGAAAATGGGCTTGTTGCGTAGTGGGACAATGAAATTCGATGTTACGTGCAATGTGAAGTTGGATACATTGGCCAAAACCACTCAAGTACTCTCTCAACAATGCGAAACTAAACGACACTAG 768 0.487 MEERVLLPSPPPPPPPLEKKHSTNKLELPDFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFCVLFFIIFFVLLILLGAVLGGLFSMLLTPKDPQFSITRFKVVETKPHPKYDVTLEVHNLNSDVGVSYKNKGHVSLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVTNDKKKVNVTFSLAIHALARMKMGLLRSGTMKFDVTCNVKLDTLAKTTQVLSQQCETKRH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0896 255 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 253 - -
Gso4g0896 255 MobiDBLite consensus disorder prediction 1 19 - -
Gso4g0896 255 MobiDBLite consensus disorder prediction 1 25 - -
Gso4g0896 255 Pfam Late embryogenesis abundant protein 129 232 IPR004864 -
Gso4g0896 255 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 21 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0896 Gso-Chr4 9719588 9720654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0896 33 252 EF-hand Containing Proteins AT5G21130 30.837 9.37e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0896 - - gmx:100790243 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0896 4 9719588 9720654 Gso4g0896 4 9719588 9720654 ECH
Gso4g0896 4 9719588 9720654 Gso6g0884 6 8436763 8438140 GST