Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0880 ATGGATTCTATCAACAGTGGAAGCATCTCTTCTAGCGATGATGAATACGATTCATCATCACACGCTGATCCACCGTTCCACAATCATTTCGGTTCCATCTCTCACCCGCAACAACCACCCCTGGTTCCATCTCATCCTTCAATGTTTGATCTTTCCTCAAGCTACCTCCACGCTGTCTCACAATCCCACCAAAACCCACATAATCGCTTGTTTAACTTAGACTCTCGAGGCCAAAGATCTGAACCCAATTGCACCCTCCCAGAAAGCCTACCATCTTCGACATCAGCAACACCAACAACAACAAATCAATGCCTGTTGGGTCACGACAACATCAATGATAATTCAAGACAACAACTCCCATCATCTCCACAAACCAACAACCTCGTACGCAACTCAAAGAAACGAAGCAGAGCTTCAAGGCGTGCACCCACCACCGTTCTCACCACCGACACCAACAACTTCAGATCCATGGTTCAAGAGTTCACCGGAATCTCTGCACCTCCCTTTTCATCTTCCTTCTCTCGACGCATCCCTCTTCGCCCAAACCCTTTGCTTTCAACAACTTCATCGAGGACCAGCTTGTTACACAACAACAACAATATCAATGTTTCTCCTAATAATAACTACCAACTACTTCCTGATCTATCTTTACCCTATCAACCCCCACCACAGAATCTCATACAAGATATTCACTCCATTCCCTCATTCCACCCTTCTCCTTCTCTTCACTCTCTTGTCCCTGCAGGGCTTGCTGCAAAGTCTTTATCCACCATGCCCACACTTGATGCGCATGATCTGCTGGGTGCTCATGAACATGTTTCTGAGGGCATGTTTCTGAGGAGTGACGGTGATGCAGGAGGGAGAAAAGATCCGTTTAGGTGCTTAGATCTTGGGAATAATAATAGTTATGGTGGCTGCAAGCTCAATATGTCGGTTTCTGCGTCGAGCAGCTTGAACCATGAGAAGAACTTGGAGAATGTTGGTAATGGAAATTCCCCTAGGGAAGGTGCCGTGGAGGCGTGGATTTGTTCCTCTGAGCAATAG 1044 0.4665 MDSINSGSISSSDDEYDSSSHADPPFHNHFGSISHPQQPPLVPSHPSMFDLSSSYLHAVSQSHQNPHNRLFNLDSRGQRSEPNCTLPESLPSSTSATPTTTNQCLLGHDNINDNSRQQLPSSPQTNNLVRNSKKRSRASRRAPTTVLTTDTNNFRSMVQEFTGISAPPFSSSFSRRIPLRPNPLLSTTSSRTSLLHNNNNINVSPNNNYQLLPDLSLPYQPPPQNLIQDIHSIPSFHPSPSLHSLVPAGLAAKSLSTMPTLDAHDLLGAHEHVSEGMFLRSDGDAGGRKDPFRCLDLGNNNSYGGCKLNMSVSASSSLNHEKNLENVGNGNSPREGAVEAWICSSEQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0880 347 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 344 IPR039609 -
Gso6g0880 347 MobiDBLite consensus disorder prediction 59 132 - -
Gso6g0880 347 MobiDBLite consensus disorder prediction 1 15 - -
Gso6g0880 347 MobiDBLite consensus disorder prediction 1 47 - -
Gso6g0880 347 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 344 - -
Gso6g0880 347 Pfam VQ motif 141 168 IPR008889 -
Gso6g0880 347 MobiDBLite consensus disorder prediction 59 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0880 Gso-Chr6 8368710 8370579 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0880 - - gmx:102666924 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0889 4 9589050 9590108 Gso6g0880 6 8368710 8370579 GST
Gso14g1444 14 44943926 44945212 Gso6g0880 6 8368710 8370579 PCT
Gso13g0622 13 20189103 20191285 Gso6g0880 6 8368710 8370579 PCT
Gso6g0880 6 8368710 8370579 Gso14g1444 14 44943926 44945212 PCT
Gso6g0880 6 8368710 8370579 Gso13g0622 13 20189103 20191285 PCT