Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0622 ATGGATTCTGGCAATAGTGGAAGTATCTCTTCAAGTGGTGATGAAGAATACGATTCACGAGCTGATCACACAGTACTACTCCCTTCAACTTTCATCAATAACCACCACCATCACCACCCTTCCCAATTTGGCTCCATCTCACAACACCCTCTTGTTTCTTCTTCTCATTACCAACAACACCAACACCAACCTCATCATCCTTCTTTGTTTGATCTATCTTCAAGCTATCTCCACGCCCTCTCTCAACCAAACCAATCAACAAATCCAAACTCCTTCCTCAACTTGGACACCGCCACGTCGTCGACACTACCTCGAAGATCTGAACCCGATTGCACCATTAATGTTACCTCATCACCACCACCACCACCAACAAAGACAACAAACATAAACCAATGTTTGTTGGGTTGTCAAGTAGGTCTCAACACGGACAATGCAAGACCAAATACAATCCTACTCGAGTCAGGTAGAACCAGTAACGTTGGTCGCAACTCGAAGAAGCGAACCAGGGCTTCGAGGAGGGCACCAACCACCGTTCTCACCACCGACACTTCGAATTTTAGAGCCATGGTTCAAGAGTTCACCGGAATCCCTGCACCGCCGTTCTCAGCTTCTTCCTCGTACTCTCGAAGGCTTGATCTTTTCACTGGCTCGTCCTCCTTAAGAAGCTCCTCTCACTTAGACACAACAACGGGTACTCCTTTCTACCCTTTGCATCCTTCACCACAAAAGGTACTTCATCATCATTATCATCATCAACAACATCATCAAAACCCATTGCTTTTATCTTCCTCATCATCACCTTATAGTAACATGGTTGATGCTATAGCTTCCACTACCACCACCAACAATTCTTCATCTAATAACAACAACAACCCAATTAACTTCCAACAACAACAACTTCCTCCTGATTTTGGTTTACCCTATCATCATAATAACCCACAAAACATCATGTTAAGCATGCAAAACCACCCTACTCTTGCATTTCACCCTCCACCACAACCTCTTCCCCCTTTTGGGTTCAGTACAAAGTTACCATCAATTGAGGATCTGGGTATGAGCCATGGCCAAGTCAATAATAATAATCCAAATTTTGTTTCAAGTGGGCATGTAACTTCTGAAGGGGTGGCACTGAGGAGTGTGAACAGTGATGGAGGAGGAGCAAGAGATGTTTCGTTAAGGTCATTGGATGGTGGTAGCTGCAAGTTGAACTTTTCTGTGGCTTCTGCGTCCACTAGCTTGAACCATGATAAGAGCACCTTACAAAATATTAATAATAATGATAATAACAACGCTACTACTAGAGGGGAAAGTACCGTGGATTCCTGGATTTGTTCTTCTGATCGAATAGACTAA 1353 0.4375 MDSGNSGSISSSGDEEYDSRADHTVLLPSTFINNHHHHHPSQFGSISQHPLVSSSHYQQHQHQPHHPSLFDLSSSYLHALSQPNQSTNPNSFLNLDTATSSTLPRRSEPDCTINVTSSPPPPPTKTTNINQCLLGCQVGLNTDNARPNTILLESGRTSNVGRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSASSSYSRRLDLFTGSSSLRSSSHLDTTTGTPFYPLHPSPQKVLHHHYHHQQHHQNPLLLSSSSSPYSNMVDAIASTTTTNNSSSNNNNNPINFQQQQLPPDFGLPYHHNNPQNIMLSMQNHPTLAFHPPPQPLPPFGFSTKLPSIEDLGMSHGQVNNNNPNFVSSGHVTSEGVALRSVNSDGGGARDVSLRSLDGGSCKLNFSVASASTSLNHDKSTLQNINNNDNNNATTRGESTVDSWICSSDRID* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0622 450 MobiDBLite consensus disorder prediction 278 298 - -
Gso13g0622 450 MobiDBLite consensus disorder prediction 32 114 - -
Gso13g0622 450 Pfam VQ motif 173 200 IPR008889 -
Gso13g0622 450 MobiDBLite consensus disorder prediction 156 175 - -
Gso13g0622 450 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 447 IPR039609 -
Gso13g0622 450 MobiDBLite consensus disorder prediction 32 126 - -
Gso13g0622 450 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 447 - -
Gso13g0622 450 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0622 Gso-Chr13 20189103 20191285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0622 - - gsj:114382008 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1444 14 44943926 44945212 Gso13g0622 13 20189103 20191285 GST
Gso13g0622 13 20189103 20191285 Gso4g0889 4 9589050 9590108 PCT
Gso13g0622 13 20189103 20191285 Gso6g0880 6 8368710 8370579 PCT
Gso4g0889 4 9589050 9590108 Gso13g0622 13 20189103 20191285 PCT
Gso6g0880 6 8368710 8370579 Gso13g0622 13 20189103 20191285 PCT