Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0848 ATGAAGAACCCCACACTCCGAGAGAGAAGAGGAGGATCAATGCATAGGCGCAACAAGACGGTTGTTCCATTGGGCATGCTCAGAAGGTTTCTCGCCGCGTCCATATTCTCAATAGTCGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCACCCACTGATCACAAGTTCAATGATAAGATCCCCTCGTTTCGTGACCCGCAAAGCTGGACTAGAGAACTCGCTCCGCCTCATCTATCCAAGGCTCCACTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGATTCAGACTACGAGAAACTGTGGAAGCCTCCATCAAATCATGGGTTTATACCCTGTACAAAGCCTACTCCTAATTACTCAACTCCTGGAAGGTCACGTGGTTACCTTTCTGTTCATACAAATGGAGGGCTAAACCAAATGCGTACTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCATGATACTAGCATTTTCTCTGATATCTTTGATGAAGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAAATCATTAAGAAGCTTCCCAAAAAACTGGTTAATGCAACCAAAATTGTCATGCAATTCAGAAGCTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGGATAATTTCAATGTAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAACCTACCTCCAGAGATTCAGAAACTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGCTTCTCTCCGCACATTGAAAAAATGGGAAAAATATTGGTGGAGAGAATGAAGTCATTCGGCCCTTATATTGCATTACATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACACATGAATTATCTACAGCTGAGGCTGAAGAGCTACGGATTATCAGAGAGAATACTACTTATTGGAAAAGAAAGTATATTAACCCCATAGAAGAAAGGTCCAAAGGTTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATACCCATCAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGGGGGGAGTCCCATATGACTGACCTGCAATCCCGCTATCCATTGTTAATGAGCAAGGAAAAGTTAGCATCCATTGAGGAGCTTGAACCCTTTTCTAGTCATGCGTCTCAAATGGCTGCTCTTGACTATATTGTATCGGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGAAACATGGCAAAGGCTGTTGAAGGCCATCGTCGTTTTCTTGGGAGTGGAAGAACAATATCTCCTGATAGGAAAGCGCTTGTTCATCTGTTTGATAAACTGGCAAATGGATCAATGACTGAGGGGAGAACACTTTCTAATAAAATCATTGATCTCCACAAAAAACGGCTTGGCTTCTTCAGAAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGCTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCAATATAAACGCTTCTCACTTCTCAGTATAG 1620 0.4154 MKNPTLRERRGGSMHRRNKTVVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTDHKFNDKIPSFRDPQSWTRELAPPHLSKAPLSVPKLKDSRKDSDYEKLWKPPSNHGFIPCTKPTPNYSTPGRSRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWHDTSIFSDIFDEEWFISSLANDIKIIKKLPKKLVNATKIVMQFRSWSGMDYYENEIAALWDNFNVIRASKSDSRLANNNLPPEIQKLRCRACYEALRFSPHIEKMGKILVERMKSFGPYIALHLRYEKDMLAFSGCTHELSTAEAEELRIIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGESHMTDLQSRYPLLMSKEKLASIEELEPFSSHASQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRFLGSGRTISPDRKALVHLFDKLANGSMTEGRTLSNKIIDLHKKRLGFFRKRKGPVSGTKGLDRFRSEETFYANPLPGCLCRTESLNINASHFSV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0848 539 PIRSF UCP009360 2 528 IPR024709 -
Gso6g0848 539 Pfam GDP-fucose protein O-fucosyltransferase 131 446 IPR019378 -
Gso6g0848 539 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 11 539 - -
Gso6g0848 539 PANTHER OS02G0726500 PROTEIN-RELATED 11 539 - -
Gso6g0848 539 CDD O-FucT_plant 131 452 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0848 Gso-Chr6 8060229 8066052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0848 75 528 Miscellaneous Gene Families AT1G22460 66.079 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0848 - - gmx:100807411 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0848 4 9013908 9019176 Gso6g0848 6 8060229 8066052 GST
Gso14g1491 14 46127509 46133707 Gso6g0848 6 8060229 8066052 PCT
Gso2g1784 2 41549938 41555658 Gso6g0848 6 8060229 8066052 PCT
Gso6g0848 6 8060229 8066052 Gso14g1491 14 46127509 46133707 PCT
Gso6g0848 6 8060229 8066052 Gso2g1784 2 41549938 41555658 PCT