Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0848 ATGAAGAACCCCACACTCCGAGAAAGAAGAGGAGGATCAATGCAGAGGCGCAACAACACGGTTGTTCCATTGGGCATGCTCAGAAGGTTTCTCGGCGCATCAGTATTCTCAATAGTTGTCACTTCTTTCTTCTTTGTTCATGTTCACGTTTCTCCTTCACCTTCTGATCACAAGTTCAATGATAAGATCCTCTCGTTTCGTGACCCGCAAAGCTGGACTCGAGAACTCGTTCCGCCTCATCTATCCAAGGCTCCACTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGATTCAGACTACGAGAAACTGTGGAAGCCTCCATCAAATCATGGGTTCATACCCTGTACAAAGCCTACTCCTAATTACTCAACTCCTGGAAGGTCACGTGGTTACCTTTCTGTTCATACAAATGGAGGGCTAAACCAAATGCGTACTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCCACTCTTGTAATCCCGGAACTTGATAAAAAGTCATTTTGGCATGATACTAGCAATTTCTCTGATATCTTTGATGAAGAGTCGTTTATTAGTTCTCTAGCTAATGATATAAAAATCATTAAGAAGCTTCCCAAAAAACTGGTTAATGCAACCAAAATTGTCATGCAATTCAGAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGGATAATTTCAAAGTAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAACCTGCCTCCAGAGATTCAGAAGCTTCGCTGCCGTGCATGTTATGATGCTCTTCGTTTCTCTCCACACATTGAAAAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTCGGCCCTTATATTGCATTACATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACACATGAATTATCTGCAGTTGAGGCTAAAGAGCTATGGATTATCAGACAGAATACTACTTATTGGAAAAGAAAGTATATTAATCCTATAGAAGAGAGGTCCAAAGGTTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATACCCATCAAACACACCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAGTCCCATATGACTGACCTGCAATCCCGCTATCCATTGTTAATGAGCAAGGAAAAGTTAGCATCCATTGAGGAGCTTGAACCCTTTTCTAGTCATTCGTCTCAAATGGCTGCTCTTGACTATATTGTATCAGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGAAACATGGCAAAGGCTGTTGAAGGCCATCGTCGTTTTCTTGGGAGTGGAAGAACAATATCTCCTGATAGGAAAGCGCTTGTTCGTCTGTTTGATAAACTGGCAAATGGATCAATGACTGAGGGGAAAACACTGTCTAATAAAATCATTGATCTCCACAAAAAACGGCTTGGCTTCAGAAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGCTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCTCCATGAACACTTCTCACTTTTCAGTATAG 1617 0.4137 MKNPTLRERRGGSMQRRNNTVVPLGMLRRFLGASVFSIVVTSFFFVHVHVSPSPSDHKFNDKILSFRDPQSWTRELVPPHLSKAPLSVPKLKDSRKDSDYEKLWKPPSNHGFIPCTKPTPNYSTPGRSRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWHDTSNFSDIFDEESFISSLANDIKIIKKLPKKLVNATKIVMQFRSWSGMDYYENEIAALWDNFKVIRASKSDSRLANNNLPPEIQKLRCRACYDALRFSPHIEKMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHELSAVEAKELWIIRQNTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSNTPIYIAAGEIYGGESHMTDLQSRYPLLMSKEKLASIEELEPFSSHSSQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRFLGSGRTISPDRKALVRLFDKLANGSMTEGKTLSNKIIDLHKKRLGFRKRKGPVSGTKGLDRFRSEETFYANPLPGCLCRTESLSMNTSHFSV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0848 538 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 11 538 - -
Gso4g0848 538 CDD O-FucT_plant 131 452 IPR024709 -
Gso4g0848 538 PIRSF UCP009360 3 527 IPR024709 -
Gso4g0848 538 Pfam GDP-fucose protein O-fucosyltransferase 131 446 IPR019378 -
Gso4g0848 538 PANTHER OS02G0726500 PROTEIN-RELATED 11 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0848 Gso-Chr4 9013908 9019176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0848 75 527 Miscellaneous Gene Families AT1G22460 66.740 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0848 - - gmx:100775284 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0848 4 9013908 9019176 Gso4g0848 4 9013908 9019176 ECH
Gso4g0848 4 9013908 9019176 Gso6g0848 6 8060229 8066052 GST
Gso14g1491 14 46127509 46133707 Gso4g0848 4 9013908 9019176 PCT
Gso2g1784 2 41549938 41555658 Gso4g0848 4 9013908 9019176 PCT
Gso4g0848 4 9013908 9019176 Gso14g1491 14 46127509 46133707 PCT
Gso4g0848 4 9013908 9019176 Gso2g1784 2 41549938 41555658 PCT