Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0845 ATGTTGTTTGTGATTGGCGCGTTACCCATAGGTATTGGGGTGAGCCGTGCAAAAAAAGTAGGAGGAGACAGAAGACACAGTGGAACAGCGAATTTTTTATTTTTTGGTCAAAGCGGGGTCTTTAGCATGTTTCGAGGGATGATGAGCGTGAAGGCTCCCATGGGTTGGTGTCTGTGTTTCAAACCAAACAATATTACAAATAAGGTGCGAACGCCACAACACCCTCGTAGCCGCCAAGGATATACTACCTCTATTACCAGTGTGCTCCGTACTGCTTCCGAGACTAACGCGATGGCGCTTACTTTCGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCGAGGTTGAGACTCCCTCATTTTGTGTGCCAAACTCCGTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGCATTGACAAATAGCCAGCTTGAGGATATTGGTTGCCAAATAATACTTGGAAATACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATAATTTTATGAATTGGAAACGGGCTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCACTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCGATTCAAATCCAAAACCGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACTCTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATCGTGCAAGGTGGTTTAGATCCCATATTGAGGGATATCTGTGTCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGACAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGATTGTGTGTATCCTACCCGCACAGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTGAAACTAAAACACAAAGCAATGGCTGATGACACCCGTCCAATTGATCCTACTTGCCCTTGTATGGTTTGCAAGACCTACAGCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGGTCTCAACTTTTGTCATATCATAATTTATACTACATGTTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTTCCAGAATTTGTATGCGACTTTCTACGCAAAATGTTCCCGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCAGTTTTCATCATGCCAAGAACATGATTCCAAAAGTATGCCCGAAGAAGAAGTTAGTTTAGTGAGGTAA 1533 0.4416 MLFVIGALPIGIGVSRAKKVGGDRRHSGTANFLFFGQSGVFSMFRGMMSVKAPMGWCLCFKPNNITNKVRTPQHPRSRQGYTTSITSVLRTASETNAMALTFEVLGRFNRARAARLRLPHFVCQTPLFMPVGTQGTIKALTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMVCKTYSRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLRKMFPKGDVPEWVCDAMEVAGIDISSCCAQFSSCQEHDSKSMPEEEVSLVR* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0845 510 Gene3D - 97 464 IPR036511 GO:0006400|GO:0016763
Gso6g0845 510 SUPERFAMILY tRNA-guanine transglycosylase 98 461 IPR036511 GO:0006400|GO:0016763
Gso6g0845 510 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 95 486 - -
Gso6g0845 510 Hamap Queuine tRNA-ribosyltransferase [tgt]. 100 461 IPR004803 GO:0008479|GO:0101030
Gso6g0845 510 Pfam Queuine tRNA-ribosyltransferase 110 462 IPR002616 GO:0006400|GO:0016763
Gso6g0845 510 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 102 462 IPR004803 GO:0008479|GO:0101030
Gso6g0845 510 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 102 462 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0845 Gso-Chr6 8030812 8040049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0845 K00777 - gmx:100806874 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0845 4 8977655 8985368 Gso6g0845 6 8030812 8040049 GST