Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0845 ATGTTTCGAGGGATGAGCGTGGAGGCTCCCATGAGCTGGTGTCTGTGTTTCAAACCAAAACCAAACATTACTAATAAGGTGCGAGCGCCGCAACACCCTCGTAGCCGCCAAGGATATACTACCTCTATTACTGCTTCCCAGACTAACGCGATGGCGCTTACTTTTGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCGAGGTTGACACTCCCTCATTTTGTGTGCCAAACTCCGTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGCCAGCTTGAGGAAATTGGTTGCCAAATAATACTTGGAAATACATATCACTTGGCCCTTAGGCCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATAATTTTATGAATTGGAAGCGGGCTTTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCGCTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACTGGTCCAAGAATAGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATCGTGCAAGGTGGTTTAGATCCCATATTGAGGGATATCTGTGTCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAAGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGTGTTTATCCTACCCGCACAGCACGCTTTGGCACTGCTCTCGTTCCTGAGGGAGTATTGAAACTAAAACATAAAGCAATGGCCGATGACACCCGTCCAATTGATCCCACTTGCCCTTGTATGGTTTGCAAGAACTACAGCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGGTCTCAACTTTTGTCATATCATAATTTATACTACATGTTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGCGACTTTCTACGCAAAATGTTCCCGAAAGGTGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCGTTTCCATCATGCCAAGAAGATGATTCCAAAAACATGCCCGAAGAAGTTAGTTTGGTGAGGTAA 1389 0.4413 MFRGMSVEAPMSWCLCFKPKPNITNKVRAPQHPRSRQGYTTSITASQTNAMALTFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTNSQLEEIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMVCKNYSRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLRKMFPKGDVPEWVCDAMEVAGIDISSCCAPFPSCQEDDSKNMPEEVSLVR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0845 462 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 55 415 IPR004803 GO:0008479|GO:0101030
Gso4g0845 462 Gene3D - 50 417 IPR036511 GO:0006400|GO:0016763
Gso4g0845 462 SUPERFAMILY tRNA-guanine transglycosylase 51 414 IPR036511 GO:0006400|GO:0016763
Gso4g0845 462 Hamap Queuine tRNA-ribosyltransferase [tgt]. 53 414 IPR004803 GO:0008479|GO:0101030
Gso4g0845 462 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 48 439 - -
Gso4g0845 462 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 55 415 IPR002616 GO:0006400|GO:0016763
Gso4g0845 462 Pfam Queuine tRNA-ribosyltransferase 63 415 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0845 Gso-Chr4 8977655 8985368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0845 K00777 - gmx:100819664 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0845 4 8977655 8985368 Gso4g0845 4 8977655 8985368 ECH
Gso4g0845 4 8977655 8985368 Gso6g0845 6 8030812 8040049 GST