Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0836 ATGGCCCAGCAAAAGCGGTTAAGAGGTCTGGCTCAAAACCTCAAAGACAAAGCCTCGGTGATCGCCGCAGCGCTATCCACCAAGCGTCACCTCTCCTCCGTCCGTGTCCACGTGCTCCGCGCCACCACGCATGCCCTCGCGGCACCACCCTCCGAGGAAACAATTTCTGCTGTCCTCGCGGTCGGGCACGGCGGCTCCCACCGTCATCCGCGCGCGTGCATCGACACTCTCATGGACCGCCTCCACACCACGCGCAGTGCCACCGTGGCACTCAAATGCCTCTACACTCTCCACAACGTCGTCGTAAAGGGACCCTTCGTATTGAAAGACCAACTATCTTGTTACCCTTCTTACGGTGGCCACAATTTTCTTAACCTCTCCACCTTCCGAGACGTCTCGGACTTGGAATCGCTCGAACTCAGTTCTTGGGTGCGCTGGTACGCCGCCGTACTGGAACAGACCTTAACCGTTTCAAGAATCTTAGGTTATTACTTGAACGATTCTTGTGAATCCCAAGAAAAAAAGAAGACTTTGGTTGTTTCGAACGCGTCGAATGCGGATTTGTTGTATAAGTTGGAGGTTCTCGTGGGTTTCGTCGAACAAATAAGCCACGTGCCTGATTCGTTGCACCTTCAGAGGAACGAGTTGGTGTACGAGGTTGTGAGATTGGTCGGGGAGAATTATAGGAGCGTTCAAGGTGAGATTTTTTTGCGTGTTGAGGAGCTTGGGGAAAGAATAATGGAGGATTTTGATGTGGGTGAGTTGAACGAGTTGGTGGGGTATTTGGGGAGATTGGAAGAGAGTCGTGAAAAGTTGTTGCTTTTGTTTGTGAATAGAAGAAAGAATAATGGGTTTTGGGAATTGGTTGAGAAGACGAAGGGGAAGGGTGTGGCGAAGAAGAAGGAGATTGAAGGGAAGTGGCTCGCGGTGGTGGTGAGTGGCAACGCCGCCGAGTTGACTCGGTCCACGAACCCGTTTCTTGACCCGGGGCAACAACTCAGTCCGGTCCCCCGGTTAAGTTTTGCAACGGTAAGGTGA 1038 0.5241 MAQQKRLRGLAQNLKDKASVIAAALSTKRHLSSVRVHVLRATTHALAAPPSEETISAVLAVGHGGSHRHPRACIDTLMDRLHTTRSATVALKCLYTLHNVVVKGPFVLKDQLSCYPSYGGHNFLNLSTFRDVSDLESLELSSWVRWYAAVLEQTLTVSRILGYYLNDSCESQEKKKTLVVSNASNADLLYKLEVLVGFVEQISHVPDSLHLQRNELVYEVVRLVGENYRSVQGEIFLRVEELGERIMEDFDVGELNELVGYLGRLEESREKLLLLFVNRRKNNGFWELVEKTKGKGVAKKKEIEGKWLAVVVSGNAAELTRSTNPFLDPGQQLSPVPRLSFATVR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0836 345 Pfam ANTH domain 35 196 IPR011417 GO:0005543
Gso6g0836 345 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 334 IPR045192 GO:0048268|GO:0072583
Gso6g0836 345 SUPERFAMILY ENTH/VHS domain 34 162 IPR008942 -
Gso6g0836 345 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 334 - -
Gso6g0836 345 CDD ANTH_N_AP180_plant 35 158 - -
Gso6g0836 345 Gene3D - 6 164 IPR008942 -
Gso6g0836 345 ProSiteProfiles ENTH domain profile. 26 165 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0836 Gso-Chr6 7958685 7960123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0836 - - gmx:100788852 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0834 4 8834882 8836234 Gso6g0836 6 7958685 7960123 GST
Gso14g1505 14 46361764 46363286 Gso6g0836 6 7958685 7960123 PCT
Gso6g0836 6 7958685 7960123 Gso14g1505 14 46361764 46363286 PCT