Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0834 ATGGCCCAGCAAAATCGATTAAGAAATTTGGCTCAAAGCCTCAAAGACAAAGCCTCAGTAATCGCTGCAGCGCTATCCACGAAGCGACACGTGTCCTCCGTCCGCGTGCACGTGCTCCGTGCCACCACGCACGCCCTCGCCGCGCTGCCCTCCGAGGAAACAATCTCCGCCGTCCTCGTGGTCGGGTCCCACCAGAAGCGCCACCCTCGCGCTTGCATCGACGCGCTAATGGACCGCCTCCACAGCACGCGCAGCGCCACCGTGGCACTCAAATGCCTCTACACACTCCACAACGTCGTCGTAAAGGGACCCTTCATTTTGAAAGACCAACTCTCCTGTTACCCTTCCTACGGTGGCCACAATTTCTTGAACCTCTCCACCTTCCGAGACGGCTCGGACTTGGAATCGCTCGAACTCAGTTCGTGGGTTCGCTGGTACGCGGGAGTGTTGGAACAGATCTTAACCGTTTCAAGGATCTTAGGTTATTACTTGAACCACTCTTGCGAGTCCCAAGAAAAGAAAAAGACTTTGGTTTCGAAGGCGTCGAATGCGGATTTGTTGTATAAGTTGGAGGCTCTCGTGGGTTTCGTCGAACAAACAAGCCACGTTCCAGATTCGTTGCACCTTCAGAGGAACGAGTTGGTGTACGAGGTTGTGAGATTGGTGGGGGAGAATTATAGGAGCGTGCAAGGTGAGATTTTGATGCGTGTTGAGGAGCTTGGGGGAAGAATAATGGAGGACGTGGGTGAGTTGAACGAGTTGGTGGGGTATTTGGGGAGATTGGAGGAGACTCGTGAAAAGTTGGTGCTTTTGTTTGTGAATAGGGGAAAGAACAATGAGTTCTGGGATTCGGTTAAGAAGACCAAGGAGAAGGGTGTGGCGAGGAAGAAGGAGATTGAAAGGAAGTGGCTCGCGGTGGTGGTGGTGGCAGGGAACGCCGCCGAGTTTACTCGGTCCACCAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTTGCAACGGTAAGGTGA 1026 0.537 MAQQNRLRNLAQSLKDKASVIAAALSTKRHVSSVRVHVLRATTHALAALPSEETISAVLVVGSHQKRHPRACIDALMDRLHSTRSATVALKCLYTLHNVVVKGPFILKDQLSCYPSYGGHNFLNLSTFRDGSDLESLELSSWVRWYAGVLEQILTVSRILGYYLNHSCESQEKKKTLVSKASNADLLYKLEALVGFVEQTSHVPDSLHLQRNELVYEVVRLVGENYRSVQGEILMRVEELGGRIMEDVGELNELVGYLGRLEETREKLVLLFVNRGKNNEFWDSVKKTKEKGVARKKEIERKWLAVVVVAGNAAEFTRSTNPFLDPGQLSPVPRLSFATVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0834 341 Pfam ANTH domain 35 196 IPR011417 GO:0005543
Gso4g0834 341 SMART enth_2 32 164 IPR013809 -
Gso4g0834 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 IPR045192 GO:0048268|GO:0072583
Gso4g0834 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 - -
Gso4g0834 341 CDD ANTH_N_AP180_plant 35 157 - -
Gso4g0834 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Gso4g0834 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Gso4g0834 341 Gene3D - 5 163 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0834 Gso-Chr4 8834882 8836234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0834 - - gmx:100804881 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0834 4 8834882 8836234 Gso4g0834 4 8834882 8836234 ECH
Gso4g0834 4 8834882 8836234 Gso6g0836 6 7958685 7960123 GST
Gso14g1505 14 46361764 46363286 Gso4g0834 4 8834882 8836234 PCT
Gso4g0834 4 8834882 8836234 Gso14g1505 14 46361764 46363286 PCT