Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0790 ATGACCAAAAGTGCAGAATTGTCTCAGGGAAATGGTGGTGTTTCTATTCCCACTCCTATTTCCCAGTCTGGGCCACAAGAACAAAATCAGCGTTTTCAAGGTGGAAGCGGCAATATGATTTTCAAGAGTGGACCACTTTTAATATCTTCTAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAGACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTACAGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACTAGCACCTAATGCTGCCAATGTGACAGAGCAAAATGTGAAGGATAGAGAACCAGTTAAGTCTACTGTCGTTGGCCGGCCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGTGCTAACATAGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGACGAGGATGCACATGTTGTTGGTGACTGTGTTAAGCATGTAATTCGTGAATTGCCATCTTCTCCGGTCCCTGCATCTTGTTGTAAAGCACTGTTAGAAGCTTGCCGAACTGAGCGTGGTAGTAGGGTTGCTGCTATGCGTGCAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTACTGCAAAGAATACTTATGATGATGCAAACTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGCCCCCTTCTGGCTGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAGCAGCATATTTGGGGGAGGTTCTGTGTCCCCTGATATATACACGGACTCAGAAGAAGAGAGTGGATCTGAGAGTGAGGGGGCAACTGATGATGATGATGATGATGATGATGATGATGATTATGAAGATGATGATGATGATGAACAAGATGAATCAATACACGAGTCTGATGCAGATGATGATCTTGTTAGTGAATCGTACAGTGGAACTGTAGATTCTGAGGCCGATGATGAGGACCATGATCATGCTAGTTCAAGTTCGAAATCCTCTGGTAAGAGTGAAAAATTGAAAGCCACTCGGAAGTTATCATCAAAGTCACTTGAAGGCTCACTGACTCAACATGAAGATTTCAAAAGCTCTGAACTAGTCACTAGTTCAAAGAAGACTGGCTATATAGATCAGTCCAATAAGCCTGCTGATATAGTTGGAGGAGTTTCCACTAATCAAGCTACATTGCATAATTCAAATTCTCCTAGCCCTGCTTCGTGTATCAAAAAATCCAATACCATGTCCAATGGCCCAGCACCTCGGCATCGCACCACATTGGGGCGCACCTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTCTTGAAGATGAAGATGAAATTGAAAGGCTTGAAGCTGCCAGGACAGAACTACAAACCCAAATTGACGAGGAGGTGAAGGCAAATGAAAAGCTGCAATCTCATGTGGACAAACAAAAGAAAGCCTTGGAAGAGCGTCATCTGGCTCTTGAGCAAGATGTGGCTAGACTGCAGGAACTGTTGCACAAGGAAAAGAATTCTCGGGTGGCTCTTGAGAACAAAGCAGAGCTTGAGGAATTAGCTCTGGTAGAAGCAGATCTTGCCAACTTAGAGTGGAAGGTTGATGAGATTGGGGTGAGGCTTAATGCACAAATTGAGCGGAATCATGGAAGTACTTCAGATTCCTCTAATAAACCACGACAGATATCAAATCAAGAAAGAAAATTGAAACACAAGGTAGATGCTGAAGTTGCTGCTACGCCACAATTTGACAGATCAATAAGTAAGGACACTAATATTGGTGGAGCAGAAAATGATATTGAGAGAAAGCCTGAATCAACACCTTTACCAAACAAACACCCACCAACTAGCTCCAAGCGATCTGGTACAAAGGGTGAGGGAGCAAATTCCACTCCTTCTGCACTGACAAAACTGACATCCAGACTGAACTTTTTGAAGGTGGGACGAAGTCAGACTCAAAATGAACTCCAAAGTATGGATAAAGGCCGAGACTCAAGTCGCTATTCAATCAATGTGGAAAAAGGGAAAGGATATGAACGTCCCCAATCACTTCCATCCCCCAAACTACCATCTCCTAGACTTCCATCTCCTAGACTTCCATCTCCCAAACATCTATCCCCCAATAGATTTGGAGGGTCTGAAGCTCAGTCTGTGCCAAACCCAGAAAAGGGTAAAGGGTCAGAGGCAGTTCAGATTTCAGAGAAAGGACTGAGCAAAGGTAAATCGCATCAAAGTTCAGAGAAACTGAAAAAATCAGATAGCCAGCCAGCCCATCACTCAGATGGATGGAATCAACAACCAAAACAATTGGAGAGAGGAAGATCAGAGGGTCATCAGACTTATAATGCGGATAAAGGAAGGTCAGAGGGTCATCAGACTTATAATGTGGATAAAGGTCGATGA 2790 0.4305 MTKSAELSQGNGGVSIPTPISQSGPQEQNQRFQGGSGNMIFKSGPLLISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEWKTALENALALAPNAANVTEQNVKDREPVKSTVVGRPILLALEDVDGTPSFLEKALTFIEEHGANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASCCKALLEACRTERGSRVAAMRAAINDTFPEPNRRLLQRILMMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGGGSVSPDIYTDSEEESGSESEGATDDDDDDDDDDDYEDDDDDEQDESIHESDADDDLVSESYSGTVDSEADDEDHDHASSSSKSSGKSEKLKATRKLSSKSLEGSLTQHEDFKSSELVTSSKKTGYIDQSNKPADIVGGVSTNQATLHNSNSPSPASCIKKSNTMSNGPAPRHRTTLGRTSARKNLSMESIDFPLEDEDEIERLEAARTELQTQIDEEVKANEKLQSHVDKQKKALEERHLALEQDVARLQELLHKEKNSRVALENKAELEELALVEADLANLEWKVDEIGVRLNAQIERNHGSTSDSSNKPRQISNQERKLKHKVDAEVAATPQFDRSISKDTNIGGAENDIERKPESTPLPNKHPPTSSKRSGTKGEGANSTPSALTKLTSRLNFLKVGRSQTQNELQSMDKGRDSSRYSINVEKGKGYERPQSLPSPKLPSPRLPSPRLPSPKHLSPNRFGGSEAQSVPNPEKGKGSEAVQISEKGLSKGKSHQSSEKLKKSDSQPAHHSDGWNQQPKQLERGRSEGHQTYNADKGRSEGHQTYNVDKGR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0790 929 CDD RhoGAP 185 323 - -
Gso6g0790 929 SUPERFAMILY PH domain-like 11 146 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 869 886 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 690 707 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 741 788 - -
Gso6g0790 929 SMART PH_update 40 148 IPR001849 -
Gso6g0790 929 MobiDBLite consensus disorder prediction 900 929 - -
Gso6g0790 929 ProSiteProfiles Rho GTPase-activating proteins domain profile. 176 375 IPR000198 GO:0007165
Gso6g0790 929 MobiDBLite consensus disorder prediction 677 929 - -
Gso6g0790 929 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 3 794 - -
Gso6g0790 929 Coils Coil 577 604 - -
Gso6g0790 929 Pfam PH domain 42 145 IPR001849 -
Gso6g0790 929 Pfam RhoGAP domain 185 328 IPR000198 GO:0007165
Gso6g0790 929 MobiDBLite consensus disorder prediction 388 429 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g0790 929 Gene3D - 27 147 IPR011993 -
Gso6g0790 929 MobiDBLite consensus disorder prediction 382 558 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 814 831 - -
Gso6g0790 929 Gene3D Rho GTPase activation protein 152 376 IPR008936 GO:0007165
Gso6g0790 929 Coils Coil 609 662 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 789 803 - -
Gso6g0790 929 SMART RhoGAP_3 182 372 IPR000198 GO:0007165
Gso6g0790 929 MobiDBLite consensus disorder prediction 487 504 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 511 558 - -
Gso6g0790 929 CDD PH 42 141 - -
Gso6g0790 929 ProSiteProfiles PH domain profile. 39 146 IPR001849 -
Gso6g0790 929 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 3 794 - -
Gso6g0790 929 MobiDBLite consensus disorder prediction 444 473 - -
Gso6g0790 929 SUPERFAMILY GTPase activation domain, GAP 184 376 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0790 Gso-Chr6 7441079 7455106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0790 - - gmx:100817373 1624.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0784 4 8035165 8049348 Gso6g0790 6 7441079 7455106 GST