Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0784 ATGACCAACACAAGTGCAGAATTGTCTCAGGGAAATGGTGGTGTTTCTATTCCCCCTCCTAATTCCCAGTCTGGGCCACAAGAGCAAAATCTGCGTTCTCAAGGTGGAAGCGGCAATATGATTTTCAAGAGTGGACCACTTTTCATATCTTCCAAAGGAATTGGGTGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTCTCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTACGGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACTAGCACCTAGTGCTGCCAATGTGACAGAGCAAAATGTGAAGGATAGAGAACCAGTTAAATCTACCGTTGTTGGCCGGCCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCCAACATAGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGACGAGGATGCACATGTTGTTGGTGACTGTGTTAAGCATGTAATTCGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGTAAAGCACTGTTAGAAGCTTGTCGAACTGAGCGTGGTAGTAGGGTTGCTTCTATGCGTGCAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTACTGCAAAGAATACTTATGATGATGCAAACTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGCCCCCTTCTGGCTGGGGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAGCAGCATATTTGGGGAAGGTTCTGTGACCCCTGATATATACACCGACTCAGAAGAAGAGAGTGGATCTGAGAGTGAGGAGGCAACTGATGATGATGATGATGATGATGATTTGTCCTATGATTATGATGATGATGATGATGAACAAGATGAATCAATACACGAGTCTGATGCAGATGATGATCTTGTTAGTGAATCGTACAGCGGAACTGGAGATTCCGAGGCTGATGATGAGGACCATGATCATGCTAGTTCAAGTTCAAAATCCTCAGGTAAGAGTGAAAAATTGAAAGCCTCTCGGAAGTTATCATCAAAGTCACTTGAAGGCTCACTGACTCAACATGAAGATATTAAAAGCCTTGAACATGTCCCGAGTCCAAAGAAGACTGGCTATATAGATCAGTCCTATAAGCCTGATGATATAGTTGGAGGAGTTTCCACTGATGAAGCTACATTGCATAATTCAAATTCTCCTAGCCCTGCTTCATGTATCAAAAAATCCAATACCATGTCCAATGGCCCAGCACCTCGGCATCGCACCATATTGGGTCGCACCTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGAAGATGAAGATGAAATTGAAAGGCTTGAAGCTGCCAGGACAGAATTACAAACCCAAATTGACAAGGAGGTGAAGGCAAATGAACAGCTGCAATCTCATGTGGATAAACAAAAGAAAGCCTTGGAAGAGCGTCATCTAGCTCTTGAGCAAGACGTAGCTAGACTACAGGAACAGTTGCACAAGGAAAAGAATTCTCGGGTAGCTCTTGAGAACAAAGCAGAGCTTGAGGAATTAGCTCTGGTAGAAGCAGATCTTGCCAACTTAGAGTGGAAGGTTGATGAGATTGGGGTGAGGCTTAATGAACTTGAGCAGAATTATGGAACTACTTCGGATTCCTCTATTCAACTGCGACAGATATCAAATCATGAAAGAAAATTGAAACGCAAGACAGATGCTGAAGTTGCTGCTATGTCACAATCTGACAGATCAATAAGTAAGGGTACGGTAATGGCACAACAGGACACTCATATTGGTGGAGCAGAAAATGATTTCGAGAGAAAGCCTGATTCACCACCTTTACCAAACAAGCACCCACCAACTAGCTCCAAGCGATCTGGTACAAAGGGTGAGCAGGGAGCAAATTCCACTCCTTCTGCACTGACAAAACTGACATCCAGACTGAACTTTTTGAAGGTGGGACGAAGTCAGACTCCAAATGAACTCCAAAATATGGATAAAGGCCGAGACTCAAGTCGCTATTCAATCAATGTGGAAAAAGGAAAAGGATCTGAACGTCCCCAATCACTTCTATCCCCCAAACTACCATCTCCTAGACTTCCATCTCCCAGACATCCATCCCCCAACAGATTTGGAGGGTCTGAAGCTCACTCTGTGCCAAACCCAGAAAAGGGTAAAGGGTCAGAGCCAGTTCAGATTTCAGACAAATCGCATCAAAGTTCAGAGAAACTGAAAAAATCAGATAGCCAGCCAGCCCATCACTCAGATGGATGGAATCAACAACCAAAACACTTGGAGAGAGGAAGGTCAGAGGGTCATCAGACTTATAATGTGGATAAAGGTCGATGA 2742 0.4336 MTNTSAELSQGNGGVSIPPPNSQSGPQEQNLRSQGGSGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVSQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEWKTALENALALAPSAANVTEQNVKDREPVKSTVVGRPILLALEDVDGTPSFLEKALTFIEEHGANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASCCKALLEACRTERGSRVASMRAAINDTFPEPNRRLLQRILMMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGEGSVTPDIYTDSEEESGSESEEATDDDDDDDDLSYDYDDDDDEQDESIHESDADDDLVSESYSGTGDSEADDEDHDHASSSSKSSGKSEKLKASRKLSSKSLEGSLTQHEDIKSLEHVPSPKKTGYIDQSYKPDDIVGGVSTDEATLHNSNSPSPASCIKKSNTMSNGPAPRHRTILGRTSARKNLSMESIDFPIEDEDEIERLEAARTELQTQIDKEVKANEQLQSHVDKQKKALEERHLALEQDVARLQEQLHKEKNSRVALENKAELEELALVEADLANLEWKVDEIGVRLNELEQNYGTTSDSSIQLRQISNHERKLKRKTDAEVAAMSQSDRSISKGTVMAQQDTHIGGAENDFERKPDSPPLPNKHPPTSSKRSGTKGEQGANSTPSALTKLTSRLNFLKVGRSQTPNELQNMDKGRDSSRYSINVEKGKGSERPQSLLSPKLPSPRLPSPRHPSPNRFGGSEAHSVPNPEKGKGSEPVQISDKSHQSSEKLKKSDSQPAHHSDGWNQQPKHLERGRSEGHQTYNVDKGR* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0784 913 SMART PH_update 41 149 IPR001849 -
Gso4g0784 913 Pfam RhoGAP domain 186 329 IPR000198 GO:0007165
Gso4g0784 913 MobiDBLite consensus disorder prediction 520 547 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 690 707 - -
Gso4g0784 913 SUPERFAMILY GTPase activation domain, GAP 185 378 IPR008936 GO:0007165
Gso4g0784 913 ProSiteProfiles Rho GTPase-activating proteins domain profile. 177 376 IPR000198 GO:0007165
Gso4g0784 913 Coils Coil 578 601 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 890 913 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 867 883 - -
Gso4g0784 913 SMART RhoGAP_3 183 373 IPR000198 GO:0007165
Gso4g0784 913 MobiDBLite consensus disorder prediction 445 474 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 1 36 - -
Gso4g0784 913 CDD PH 43 142 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 678 913 - -
Gso4g0784 913 SUPERFAMILY PH domain-like 13 147 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 751 796 - -
Gso4g0784 913 Pfam PH domain 43 146 IPR001849 -
Gso4g0784 913 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 4 802 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 797 811 - -
Gso4g0784 913 CDD RhoGAP 186 324 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 708 724 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 380 560 - -
Gso4g0784 913 Gene3D Rho GTPase activation protein 153 377 IPR008936 GO:0007165
Gso4g0784 913 ProSiteProfiles PH domain profile. 40 147 IPR001849 -
Gso4g0784 913 Coils Coil 610 677 - -
Gso4g0784 913 MobiDBLite consensus disorder prediction 389 430 - -
Gso4g0784 913 Gene3D - 28 148 IPR011993 -
Gso4g0784 913 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 4 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0784 Gso-Chr4 8035165 8049348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0784 - - gmx:100796201 1596.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0784 4 8035165 8049348 Gso4g0784 4 8035165 8049348 ECH
Gso4g0784 4 8035165 8049348 Gso6g0790 6 7441079 7455106 GST