Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0787 ATGCATGGACACCAACCATTATATCCCCCCACCGAGTCACCAACCATGGACGTTAAGTTTGGCACCACATTAATAGTTATTTTCTCCGTAATGTGGCTCATGAGGGTGAATGCCATTGACCCTTGTGCCTCTCAACCGGATAATTCGGACCTCAACGTGATTCCCATCTACAGCAAATGCTCACCGTTCAAACCACCCAAGGCAGACACATGGGACAACAGAATTATAAACATGGCCTCAAAAGACCCAGTCCGAGTGAAATACTTGTCCACCTTAGTGAGTCAAAAGACAGTCTCCACGGCCCCAATCGCTTCGGGCCAGGCCTTCAACATCGGCAACTATGTGGTGAGGGTCAAATTGGGAACACCCGGTCAACTTTTGTTCATGGTCCTCGACACCAGCACTGACGAGGCCTTCGTACCCTGCTCGGGCTGCACTGGCTGCTCCGACACCACTTTCTCGCCCAAAGCCTCAACCAGTTACGGCCCATTAGACTGCTCCGTCCCCCAGTGCGGACAGGTCCGTGGGCTTTCTTGCCCCGCCACGGGAACCGGCGCGTGCTCCTTCAACCAATCCTACGCGGGCTCATCTTTCTCCGCCACCCTAGTCCAAGACGCATTAAGATTGGCAACTGATGTTATCCCCTACTACTCCTTCGGCTGCGTCAACGCCATCACCGGAGCCTCGGTCCCTGCCCAAGGGCTTTTGGGCCTTGGCCGAGGCCCGTTGTCCTTGCTCTCCCAATCCGGGTCAAATTACTCGGGCATATTCTCTTACTGTCTCCCCAGTTTCAAGTCCTACTACTTCTCCGGGTCGCTCAAGCTGGGGCCCGTGGGCCAGCCCAAGAGCATTCGTACCACTCCGCTTCTTCGCAGCCCGCACCGTCCTTCTCTTTACTACGTGAACTTCACCGGGATCAGCGTGGGGCGCGTCCTGGTACCCTTTCCCAGCGAGTATCTTGGGTTTAACCCGAACACTGGATCCGGAACCATAATTGATTCGGGCACGGTGATAACCCGGTTCGTGGAGCCCGTTTACAACGCGGTGAGGGAGGAGTTCAGGAAGCAGGTAGGGGGAACTACATTCACGAGCATTGGAGCTTTCGACACGTGTTTCGTGAAAACCTACGAAACGCTGGCGCCGCCAATTACGCTGCACTTCGAGGGGTTGGACCTGAAGCTGCCGTTGGAGAACAGCTTGATTCATAGCAGCGCGGGTTCGTTGGCGTGTCTTGCGATGGCGGCGGCACCCGACAATGTGAACTCGGTATTGAACGTCATTGCCAACTTTCAGCAACAGAACCTTAGGATTTTGTTTGATATCGTCAATAATAAAGTTGGCATAGCCCGTGAGGTTTGTAACTAG 1365 0.5436 MHGHQPLYPPTESPTMDVKFGTTLIVIFSVMWLMRVNAIDPCASQPDNSDLNVIPIYSKCSPFKPPKADTWDNRIINMASKDPVRVKYLSTLVSQKTVSTAPIASGQAFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSDTTFSPKASTSYGPLDCSVPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDALRLATDVIPYYSFGCVNAITGASVPAQGLLGLGRGPLSLLSQSGSNYSGIFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRSPHRPSLYYVNFTGISVGRVLVPFPSEYLGFNPNTGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTTFTSIGAFDTCFVKTYETLAPPITLHFEGLDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDIVNNKVGIAREVCN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0787 454 SUPERFAMILY Acid proteases 107 453 IPR021109 -
Gso6g0787 454 Pfam Xylanase inhibitor C-terminal 299 449 IPR032799 -
Gso6g0787 454 ProSiteProfiles Peptidase family A1 domain profile. 114 449 IPR033121 -
Gso6g0787 454 Pfam Xylanase inhibitor N-terminal 114 276 IPR032861 -
Gso6g0787 454 Gene3D Acid Proteases 90 276 IPR021109 -
Gso6g0787 454 Gene3D Acid Proteases 277 454 IPR021109 -
Gso6g0787 454 PANTHER ASPARTYL PROTEASE AED3 22 454 - -
Gso6g0787 454 PANTHER ASPARTYL PROTEASE-RELATED 22 454 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0787 Gso-Chr6 7431787 7433507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0787 105 454 Miscellaneous Gene Families AT1G77480 26.615 5.91e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0787 - - gmx:100816307 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0781 4 8027460 8029230 Gso6g0787 6 7431787 7433507 GST