Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0781 ATGGAGGCTAAGTTGGCCACCACCATAATACTTATTTTCTCCGTAATTTGGCTTATGAGGGTGAATGGCATAGACCCTTGTGCCTCTCAAGCGGATAATTCCGACCTGAACGTGATTCCCATCTACAGCAAATGCTCACCGTTCAAACCACCAAAGTCAGACTCATCGTGGGACAACAGAATTATAAACATGGCCTCAAAAGACCCACTCCGATTCAAATACTTGTCCACCTTAGTGGGCCAAAAGACCGTGTCCACGGCCCCAATCGCTTCGGGCCAGACCTTCAACATCGGCAACTACGTCGTCAGGGTCAAATTGGGAACCCCTGGTCAACTTTTGTTCATGGTCCTCGACACCAGCACCGACGAGGCCTTCGTTCCATGCTCGGGCTGCACGGGCTGCTCCGACACCACTTTCTCGCCCAAAGCCTCCACCAGCTATGGCCCATTGGACTGCTCTGTTCCCCAGTGCGGTCAGGTCCGCGGGCTTTCGTGCCCCGCCACAGGTACCGGCGCGTGCTCCTTCAACCAATCCTACGCGGGCTCATCTTTCTCCGCCACCCTAGTCCAAGACTCGTTAAGATTAGCCACTGATGTTATCCCCAACTACTCCTTCGGCTGCGTCAACGCCATCACCGGCGCCTCTGTCCCGGCCCAAGGGCTTTTGGGCCTGGGCCGTGGCCCGCTGTCCTTGCTCTCCCAATCCGGGTCAAATTACTCGGGCATCTTCTCTTACTGTCTCCCCAGCTTCAAGTCCTACTACTTCTCTGGGTCGCTCAAGCTCGGGCCCGTGGGCCAGCCCAAGAGCATTCGCACCACCCCGCTTCTTCGCAGCCCTCACCGTCCTTCTCTTTACTACGTGAACTTCACCGGAATCAGCGTGGGGCGTGTCCTGGTACCCTTTCCCAGCGAGTATCTTGGGTTTAACCCGAATACAGGATCCGGAACCATAATTGATTCGGGCACGGTGATAACCCGGTTCGTGGAGCCCGTTTACAACGCGGTGAGGGAGGAGTTCAGGAAGCAGGTGGGAGGCACTACATTCACGAGCATTGGAGCCTTCGATACGTGTTTTGTGAAAACCTACGAAACTCTGGCGCCGCCAATTACGCTGCACTTCGAGGGGTTGGACCTGAAACTGCCGTTGGAAAACAGCTTGATCCACAGCAGCGCGGGTTCGCTGGCGTGTCTTGCAATGGCGGCGGCACCCGACAATGTGAACTCGGTGTTGAACGTCATCGCCAACTTTCAGCAACAGAACCTTAGGATTTTGTTTGATACCGTCAATAATAAGGTTGGCATAGCCCGTGAGGTTTGTAACTAG 1323 0.5503 MEAKLATTIILIFSVIWLMRVNGIDPCASQADNSDLNVIPIYSKCSPFKPPKSDSSWDNRIINMASKDPLRFKYLSTLVGQKTVSTAPIASGQTFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSDTTFSPKASTSYGPLDCSVPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDSLRLATDVIPNYSFGCVNAITGASVPAQGLLGLGRGPLSLLSQSGSNYSGIFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRSPHRPSLYYVNFTGISVGRVLVPFPSEYLGFNPNTGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTTFTSIGAFDTCFVKTYETLAPPITLHFEGLDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0781 440 Gene3D Acid Proteases 263 440 IPR021109 -
Gso4g0781 440 PANTHER ASPARTYL PROTEASE AED3 6 440 - -
Gso4g0781 440 Gene3D Acid Proteases 78 262 IPR021109 -
Gso4g0781 440 PANTHER ASPARTYL PROTEASE-RELATED 6 440 IPR001461 GO:0004190|GO:0006508
Gso4g0781 440 ProSiteProfiles Peptidase family A1 domain profile. 100 435 IPR033121 -
Gso4g0781 440 Pfam Xylanase inhibitor C-terminal 285 435 IPR032799 -
Gso4g0781 440 Pfam Xylanase inhibitor N-terminal 100 262 IPR032861 -
Gso4g0781 440 SUPERFAMILY Acid proteases 93 439 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0781 Gso-Chr4 8027460 8029230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0781 90 440 Miscellaneous Gene Families AT1G77480 26.804 3.33e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0781 - - gmx:100788630 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0781 4 8027460 8029230 Gso4g0781 4 8027460 8029230 ECH
Gso4g0781 4 8027460 8029230 Gso6g0787 6 7431787 7433507 GST