Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0767 ATGGCCTCGTTCCGACGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTTAACGGTTCGTTTTCAGTCTCCTCTCCGTCGCACAAGCTCCCGTCCTCAAACGCAAAATACTCCTCGCCGCTGCCGGAGATTGCGGCGGCGTTTCGTCGTCTCGCCGGCGGAGTGTTCACGCGCCGGCACGGTCGGAAAGGCCAGTGGAGGCGCGTGGCATTCAGGTGCGTGCTTTGCTTCTTCGTAGGGTTCTTGCTGGGCATGTTCCCGTTCGGCCACGTGTCGGAGGACGTTCGCTCGCACGAAATCTCGTTTGAGATGAAGCCGCCGCCGCTGCCGCGCGCCGCCGCGAACAACGCGCAGCAGCTGCTCCGGGAAGAACGCGTGCTGCGGAATCGCGTGGAGAGAGAGGGTTTCGTGGTCGATCCGGTGAGTTTAAGCGCCGAGAGGGAGTGGCAGAGCGAGAGGTTCGATTTCGCGCCGAAGAAGCCGCTGATTGTGGTGACGCCGACGTACGAGCGCACGTTTCAGGCGTATTTCCTGAATCGGCTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTGGTGGAGATGAAGGCGGCGTCGATGGAGACAGCGGAGGTGCTGAGGAAGACGGGCGTGATGTATAGGCATTTGGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGAGGGGTTCATCAGAGGAACACAGCGTTGGAACACATTGAGCATCATAGGCTTGATGGAATTGTTTACTTTGCGGATGATGATAATGTGTATTCTCTCGAGTTGTTTGACGCCTTGAGAGATATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGTGCCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGCAACGCCCTTCTTCAAATCCCATACGACAGTTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCCTGGTTGTTCAAAAATATTGAATTGGCATCTCCATTTGACTGCCCATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTGTCATACCTGTCAAGTAA 1245 0.5333 MASFRRTLSPAYPDRQYLNGSFSVSSPSHKLPSSNAKYSSPLPEIAAAFRRLAGGVFTRRHGRKGQWRRVAFRCVLCFFVGFLLGMFPFGHVSEDVRSHEISFEMKPPPLPRAAANNAQQLLREERVLRNRVEREGFVVDPVSLSAEREWQSERFDFAPKKPLIVVTPTYERTFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLVPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLTAHNIVYPKGWVLQKNLDAVIPVK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0767 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 162 407 IPR029044 -
Gso6g0767 414 Pfam Glycosyltransferase family 43 182 390 IPR005027 GO:0015018|GO:0016020
Gso6g0767 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 162 408 IPR029044 -
Gso6g0767 414 PANTHER GLYCOSYLTRANSFERASES 1 411 - -
Gso6g0767 414 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 411 IPR005027 GO:0015018|GO:0016020
Gso6g0767 414 CDD GlcAT-I 161 390 IPR005027 GO:0015018|GO:0016020
Gso6g0767 414 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0767 Gso-Chr6 7186302 7190557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0767 1 414 Glycosyltransferase AT1G27600 62.077 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0767 K20869 - gmx:100809892 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0761 4 7710970 7715440 Gso6g0767 6 7186302 7190557 GST