Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0761 ATGGCCTCTTTTCGACGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTTAACGGTTCGTTTTCAGTCTCCTCCCCGTCGCACAAGCTTCCGTCCTCAAACGCAAAGTACTCCTCGCCGCTGCCGGAGCTTGTGGCGGCGTTCCTTCGCCTCGCCGGCGGGGTGTTCACGCGCCGGCACGGTCGGAAGGGGCAGTGGAGGCGCGTGGTGGTCAGGTGCGTGCTGTGCTTCTTCGTTGGGTTCTTGCTAGGCATGTTCCCGTTCGGCCACGTGTCGGAGGACGTTCGCTCGCACGAAATCTCGTTTGAGATGAAGCCGCCGCCGCTGCCGCGCGCCGCGAACAACGCGCAGCAGCTGCTCCTCGAAGATCGCGTGCTTCGGAATCGCGTGGAGAGGGAGGGTTTGGTGATCGATCCGGTGAGTTTAAGCGCGGAGTGGGAGAGGCGGAGTGAGAGGTTCGATTTCACGCCGAGGAAGCCGCTGATTGTGGTGACGCCGACATACGACCGCGCGTTTCAGGCGTATTTCCTGAACCGGCTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTAGTGGAGATGAAGGCGGCGTCGATGGAGACAGCGGAGGTACTGAGGAAGACGGGCGTGATGTACAGGCATTTGGTGTGCAATAGGAATTCGACGGATGTGAAGGACAGAGGGGTTCACCAGAGGAACACGGCGTTGGAACACATTGAGCGTCATAGGCTTGATGGAATTGTTTACTTTGCGGATGATGATAATGTGTATTCTCTCGAGTTGTTTGACGCCTTGAGAGATATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAAAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTCCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGCGACGCCCTTCTTCAAATCCCGTACGACAGTTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCCTGGTTGTTCAAAAATATTGAATTGGCATCTCCATTTGGCTGCTAATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTGTCATACCTGTCAAGTAA 1242 0.5386 MASFRRTLSPAYPDRQYLNGSFSVSSPSHKLPSSNAKYSSPLPELVAAFLRLAGGVFTRRHGRKGQWRRVVVRCVLCFFVGFLLGMFPFGHVSEDVRSHEISFEMKPPPLPRAANNAQQLLLEDRVLRNRVEREGLVIDPVSLSAEWERRSERFDFTPRKPLIVVTPTYDRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNRNSTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSSNPVRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLAANNIVYPKGWVLQKNLDAVIPVK* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0761 413 Pfam Glycosyltransferase family 43 181 389 IPR005027 GO:0015018|GO:0016020
Gso4g0761 413 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 161 407 IPR029044 -
Gso4g0761 413 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 410 IPR005027 GO:0015018|GO:0016020
Gso4g0761 413 PANTHER GLYCOSYLTRANSFERASES 1 410 - -
Gso4g0761 413 SUPERFAMILY Nucleotide-diphospho-sugar transferases 161 406 IPR029044 -
Gso4g0761 413 CDD GlcAT-I 160 391 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0761 Gso-Chr4 7710970 7715440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0761 1 413 Glycosyltransferase AT1G27600 62.470 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0761 K20869 - gmx:100789348 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0761 4 7710970 7715440 Gso4g0761 4 7710970 7715440 ECH
Gso4g0761 4 7710970 7715440 Gso6g0767 6 7186302 7190557 GST