Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0741 ATGGAGAGGGAGAGATTGCAAATCCAGGTCATTCGCCAGCTCGATCTCGAGGACCTCGAAGTCGAAGAAGTCGATCACTCCGACGAAGACGACACCGACGACGAACCCGACGAGGAGTATGCGCTTTTCCCTTCGCAATACAATTCGGATACTTCTCCTCCTCCTCCCTCATCCGCCGAATTCAATTTCGATACCTATATTGCGCCTTCGCACACCTATCTCGGTGATGTCGAAGACACGCGCCACAGGATTGCTTTCTTGGACGGTGGAGCCATATTGAACCTTCCACTCTTTTGTCTCCGAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTTAGAGTTATTGAACCTCGTTTGGTGGCTGCTGTTGAGAGAGCTTTAACTCAAGATGATATTCCTTATACCATTGGTGTGATTCGAATTCACCGGGATATTGCAACTCGTAGGACTAAATCAGCAAGCATTGGGACAACTGCAGGGGTATTTCAGAAATGGTTTTGCAATGTACAATACTTTATTGATCTATGCTTTTATATGTGGAAGAGAATGGTTGGGATGCCTGACATGGATAGTCTCATTAAGAAGCCTGACGTTTTATCATTTCACATAGCCAGTAAAATACCTGTGTCTGAGTCTACAAGGCAGGAATTTTTGGATATTGATAGCATTGCATATAGGCTGCGTAGGGAAATTGAATTACTAGAGAGCATTGATCTTATCCGGTGTAAAAGCTGTGAGACTATAATTGCAAAAAGAAGTGATATGTTGATCATGTCAAGTGAGGGTCCTCTTAGTGCATATGTGAATTCAGGTGGTTATGTGCATGAGATAATGACTCTATACAAGGCAAATGGTTTAGCTCTCACTGGATCAGCAGTAGCAGATCACAGTTGGTTTCCCGGGTATGCATGGACAATCGCAACTTGTGCAACATGTAAAAAACAAATTGGATGGCTTTTTACAGCCAGGAACAAACAACTGAAACCCAGCTCTTTCTGGGGGATTCGGAGCTGTCAACTTGCAGAAGAAATACGCCAAAACCTTTAG 1050 0.4429 MERERLQIQVIRQLDLEDLEVEEVDHSDEDDTDDEPDEEYALFPSQYNSDTSPPPPSSAEFNFDTYIAPSHTYLGDVEDTRHRIAFLDGGAILNLPLFCLRGVVLFPGATLPLRVIEPRLVAAVERALTQDDIPYTIGVIRIHRDIATRRTKSASIGTTAGVFQKWFCNVQYFIDLCFYMWKRMVGMPDMDSLIKKPDVLSFHIASKIPVSESTRQEFLDIDSIAYRLRREIELLESIDLIRCKSCETIIAKRSDMLIMSSEGPLSAYVNSGGYVHEIMTLYKANGLALTGSAVADHSWFPGYAWTIATCATCKKQIGWLFTARNKQLKPSSFWGIRSCQLAEEIRQNL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0741 349 MobiDBLite consensus disorder prediction 19 59 - -
Gso6g0741 349 CDD CRBN_C_like 241 337 IPR034750 -
Gso6g0741 349 Pfam ATP-dependent protease La (LON) substrate-binding domain 94 162 IPR003111 -
Gso6g0741 349 Gene3D - 75 167 IPR046336 -
Gso6g0741 349 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 241 331 IPR004910 -
Gso6g0741 349 SUPERFAMILY PUA domain-like 94 236 IPR015947 -
Gso6g0741 349 Gene3D Peptide methionine sulfoxide reductase. 234 349 - -
Gso6g0741 349 MobiDBLite consensus disorder prediction 44 59 - -
Gso6g0741 349 PANTHER PROTEIN CEREBLON 2 164 - -
Gso6g0741 349 PANTHER PROTEIN CEREBLON 180 341 - -
Gso6g0741 349 PANTHER CEREBLON 180 341 - -
Gso6g0741 349 PANTHER CEREBLON 2 164 - -
Gso6g0741 349 ProSiteProfiles CULT domain profile. 238 345 IPR034750 -
Gso6g0741 349 Gene3D - 178 233 - -
Gso6g0741 349 MobiDBLite consensus disorder prediction 20 40 - -
Gso6g0741 349 SMART lon_5 94 237 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0741 Gso-Chr6 6841611 6845699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0741 K11793 - gmx:100779778 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0735 4 7289895 7296284 Gso6g0741 6 6841611 6845699 GST