Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0735 ATGGATGACGAGGAGAGAGAGAGGCTTCTGGAGAGGGAGAGATTGCAAATCCAGGTCATTCGCCAGCTCGATCTCGAGGACCTCGTAGTCGAAGAAGTCGACCACTCCGACGAAGAAGACATCGACGGCGATCCCGACGAGGAGTATGCGCTTTTCCTTTCGCAATACCATTTGGATGCTTCTCTTCCTCCTCCCTCATCTGCCGAATTCAATTTCGATACCTATATCGCGCCTTTGCATACCTATCTCGGTGATGTCGAAGACACGCGCCACAGGACTGCGTTCTTGGACGGTGGCGCCATATTGAACCTTCCCCTCTTTTGTCTCGGAGGAGTTGTACTTTTTCCTGGGGCTACTCTTCCCCTTAGAGTTATTGAACCTCATTTGGTGGCTGCTGTTGAGAGAGCTTTAACTCAAGATGATATTCCTTGTACCATTGGTGTGATTCGAATTCACAGGGATACTGCAACTCGGAGGACGAAATCAGCTAGCATTGGGACAACTGCAGAGATTCGACAATTTGGGCGCCTGGGGGATGGTTCTCTGAATGTGGTTACCCGTGGACAACAACGATTTCGCCTAAGACGGTCCTGGACTGATGTGGAAGGAGTGCCTTATGGAGAGATTCAAGTTATTGAGGAAGATCTGCCACTCAGAATTCCAAGGGATGCTTTTGGCAAATCAGCACCATTGAGTAATATGCCCTGTAGCCAAGGTGTCTCACATAATTTGTCTCCAAAGTATTCCCATGTTAACATGCAAAGGTCAAAAAATGAGGAAAATGATTCAGAACCAAATTCAGAAGAGAGTTTTGAGAGTGAGCTCTCACTGATGGAAAGGAAAATCCATCTATCAGTTGTTGGCTCCAGTTATGTGCATGATACTATGGATGAATCAGCAAATGATAATGATGTTAAATTTATGCATAACTCAGATCAGGAAATTAGATCCAATTTGGATTCAAGAACTGGGAAATGTTCCACTTCTGGAAAGCAGTCATCAAAAGAAGAGCTTAGTAGATGTAAAAATATCTGTGCCTACCCGTCTTATAAGATTTCCAAAGCATTCTGGCCCCACTGGGCGTATCAGATGTTTGACTCTTATTCGCTTGCACAAAGGGCTGCAGATATGTGGAAGCGAATAGTTGGGATGCCTGACATGGATAGTCTCATTAAGAAGCCTGATATTTTATCATTTCACATAGCCAGTAAAATACCTGTGTCTGAGTCTACAAGGCAGGAGCTTTTGGATATTGATGGCATTGCATATAGGCTGCGCAGGGAAATTGAATTACTAGAGAGCATTGATCTTATCCGGTGTAAAAGCTGCGAGACTATAATTGCAAAAAGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCATATGTGAATCCAGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTAGCTCTCGTTGGATCAGCAGCAACAGATTACAGTTGGTTTCCTGGGTATGCATGGACAATCGCAACTTGTGCAACATGTAAAACACAAATGGGATGGCTTTTTACAGCCAGGAACAAACAACTGAAACCCAGCTATTTCTGGGGGATTCGGAGCTGTCAACTTGCAGAGGAAATACGCCAAAACCTTTAG 1641 0.4442 MDDEERERLLERERLQIQVIRQLDLEDLVVEEVDHSDEEDIDGDPDEEYALFLSQYHLDASLPPPSSAEFNFDTYIAPLHTYLGDVEDTRHRTAFLDGGAILNLPLFCLGGVVLFPGATLPLRVIEPHLVAAVERALTQDDIPCTIGVIRIHRDTATRRTKSASIGTTAEIRQFGRLGDGSLNVVTRGQQRFRLRRSWTDVEGVPYGEIQVIEEDLPLRIPRDAFGKSAPLSNMPCSQGVSHNLSPKYSHVNMQRSKNEENDSEPNSEESFESELSLMERKIHLSVVGSSYVHDTMDESANDNDVKFMHNSDQEIRSNLDSRTGKCSTSGKQSSKEELSRCKNICAYPSYKISKAFWPHWAYQMFDSYSLAQRAADMWKRIVGMPDMDSLIKKPDILSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCETIIAKRSDMLVMSSEGPLSAYVNPGGYVHEIMTLYKANGLALVGSAATDYSWFPGYAWTIATCATCKTQMGWLFTARNKQLKPSYFWGIRSCQLAEEIRQNL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0735 546 CDD CRBN_C_like 438 534 IPR034750 -
Gso4g0735 546 PANTHER CEREBLON 6 539 - -
Gso4g0735 546 Pfam ATP-dependent protease La (LON) substrate-binding domain 103 433 IPR003111 -
Gso4g0735 546 ProSiteProfiles Lon N-terminal domain profile. 104 434 IPR003111 -
Gso4g0735 546 PANTHER BNAA09G40760D PROTEIN 6 539 - -
Gso4g0735 546 Gene3D - 84 212 IPR046336 -
Gso4g0735 546 SMART lon_5 103 434 IPR003111 -
Gso4g0735 546 Gene3D Peptide methionine sulfoxide reductase. 431 546 - -
Gso4g0735 546 ProSiteProfiles CULT domain profile. 435 542 IPR034750 -
Gso4g0735 546 Gene3D - 366 430 - -
Gso4g0735 546 SUPERFAMILY PUA domain-like 103 433 IPR015947 -
Gso4g0735 546 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 438 527 IPR004910 -
Gso4g0735 546 MobiDBLite consensus disorder prediction 251 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0735 Gso-Chr4 7289895 7296284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0735 K11793 - gmx:100779918 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0735 4 7289895 7296284 Gso6g0741 6 6841611 6845699 GST