Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0740 ATGATGTGGCTCAACAGGCGCAGGCACAACATTAATACTCTGCAACTACCTACAAAACAGGGAGGACTAGGACAAAAGTTGTTGGCAGTCATCATGTCGAGCGCTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGGTGTGAGGGACTTGTATGGAGAGGATTGTGCCACTGAGGACCAGCTTATCACTCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTACTGAGAGATCCACGCTACAACAAAGGGCTGGCCTTTACCGAGGGAGAGAGAGATGCTCATTACTTGCGTGGCCTTTTGCCTCCAGCTATCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGGTACATGGCAATGATGGATCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTTCTGATCAATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACGGTTGGAGAAGCATGCCAGAAATACGGAAGCATTTTTAGGCGTCCTCAGGGTCTATATATAAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGCATATTAGGACTTGGAGATCTTGGTTGCCAGGGAATGGGAATTCCTGTTGGGAAACTTTCTCTTTATACAGCTTTAGGAGGTGTCCGCCCGTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTCTACATTGGGCTTAAACAAAAGCGGGCAACTGGGCAGGAATATGCAGAGCTTCTAGAGGAGTTCATGCACGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTCATACAGTTTGAGGATTTCGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTTAATGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGTGGAACCTTAGTTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAGAGACCCGCAAGAAGATCTGGCTCGTGGACTCAAAGGTAAAAATGCCGGGCTGGTTCTATAGCTACTTTACCTTCTATAGTTTTTTCTTCCCTAACCTCCATAACAAACTTGTTCTGTTCCAGGGACTTATTGTTAGCTCTCGTTTGGAATCACTTCAGCAGTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGAGTCTTCTGGATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACTAAGGAGGTGGTTGAAACCATGGCATCCTTGAATGAGAAACCACTTATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACAGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAACTTTTTGTTCCTGGACAGGCTAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATCTCTGGTGCAATTCGTGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAAAACTATGATAAGGGACTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCGGCTAAGGCATATGATCTTGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGAAGCTACCGTTGA 1950 0.4482 MMWLNRRRHNINTLQLPTKQGGLGQKLLAVIMSSASLKEMRNGGEDYSNGHGGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAIFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLINNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGQEYAELLEEFMHAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLVDHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKVKMPGWFYSYFTFYSFFFPNLHNKLVLFQGLIVSSRLESLQQFKKPWAHEHEPVKSLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVAAKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0740 649 ProSitePatterns Malic enzymes signature. 332 348 IPR015884 GO:0004471
Gso6g0740 649 CDD NAD_bind_1_malic_enz 336 643 - -
Gso6g0740 649 Pfam Malic enzyme, NAD binding domain 336 404 IPR012302 GO:0051287
Gso6g0740 649 Pfam Malic enzyme, NAD binding domain 433 617 IPR012302 GO:0051287
Gso6g0740 649 Gene3D - 79 333 IPR037062 GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 151 175 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 211 240 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 247 269 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 307 325 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 332 348 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PRINTS Malic enzyme signature 495 511 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 Pfam Malic enzyme, N-terminal domain 145 325 IPR012301 GO:0004471
Gso6g0740 649 PANTHER MALIC ENZYME-RELATED 24 404 - -
Gso6g0740 649 PANTHER MALIC ENZYME-RELATED 429 649 - -
Gso6g0740 649 Gene3D - 334 649 - -
Gso6g0740 649 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 59 335 IPR046346 -
Gso6g0740 649 SMART malic_2 145 326 IPR012301 GO:0004471
Gso6g0740 649 PIRSF ME 426 649 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PIRSF ME 40 407 IPR001891 GO:0004470|GO:0004471
Gso6g0740 649 PANTHER MALIC ENZYME 24 404 - -
Gso6g0740 649 PANTHER MALIC ENZYME 429 649 - -
Gso6g0740 649 SMART Malic_M_2 336 618 IPR012302 GO:0051287
Gso6g0740 649 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 336 648 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0740 Gso-Chr6 6835664 6840870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0740 K00029 - gmx:100801564 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0734 4 7284170 7289343 Gso6g0740 6 6835664 6840870 GST