Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0734 ATGATGTGGCTCAATAGGCACAGGCACAACATTAATATTCTGCTACCACCTACAAAACAGGGACTAGTACAAAAGTTGTTGGCAGTGACCATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGTAAGGGACTTGTATGGAGAGGATTGTGCCACAGAGGACCAGCTTATCACCCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTGCTGAGAGATCCACGCTACAACAAAGGACTGGCCTTTACTGAGGGAGAGAGAGATGCCCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAGCTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTTGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA 1857 0.4545 MMWLNRHRHNINILLPPTKQGLVQKLLAVTMSSTSLKEMRNGGEDYSNGHGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRAAGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0734 618 Pfam Malic enzyme, N-terminal domain 143 323 IPR012301 GO:0004471
Gso4g0734 618 SMART Malic_M_2 334 587 IPR012302 GO:0051287
Gso4g0734 618 PIRSF ME 33 618 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 Gene3D - 332 618 - -
Gso4g0734 618 PANTHER MALIC ENZYME-RELATED 41 618 - -
Gso4g0734 618 Gene3D - 77 331 IPR037062 GO:0004471
Gso4g0734 618 PANTHER MALIC ENZYME 41 618 - -
Gso4g0734 618 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 334 617 IPR036291 -
Gso4g0734 618 CDD NAD_bind_1_malic_enz 334 612 - -
Gso4g0734 618 PRINTS Malic enzyme signature 149 173 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 209 238 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 245 267 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 305 323 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 330 346 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 361 377 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 PRINTS Malic enzyme signature 464 480 IPR001891 GO:0004470|GO:0004471
Gso4g0734 618 SMART malic_2 143 324 IPR012301 GO:0004471
Gso4g0734 618 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 57 333 IPR046346 -
Gso4g0734 618 Pfam Malic enzyme, NAD binding domain 334 587 IPR012302 GO:0051287
Gso4g0734 618 ProSitePatterns Malic enzymes signature. 330 346 IPR015884 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0734 Gso-Chr4 7284170 7289343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0734 K00029 - gmx:100801564 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0734 4 7284170 7289343 Gso6g0740 6 6835664 6840870 GST